cov    pid  1 [        .         .         .         .         :         .         . ] 72
 1 GI|2088869/1-72 100.0% 100.0%    EEFKSSLIQMQMISRVTNGIYLQHGLSNGSIKSDDLIPELLHFGTITPTQISAINTDKLSKIVEGINGLKLD   
 2 GI|1946989/1-69  95.8%  33.3%    DKLTNILENMQSLARLVNGISLEIGLMDGSIPSDDAIAELLH---MGPVKLQELISMDTAAASKSIKDLGTL   
 3 GI|3876798|EMB|  95.8%  26.4%    SDLQAISEQFRILSRVTNAISLQAGAIRKEIKARDLLSELLH---MPSDQLNTVMNVNVEAASLELKRMHQE   
 4 GI|1176713|SP|P  95.8%  22.2%    SQLQQIYDELSILSRVTNAIALQAAALSKTVKIREVITELLK---VDNGNFSNLLSLDPAHLVKNLDELHKK   
 5 GI|3873865|EMB|  95.8%  25.0%    SNLQLISEDFRILSRVTNAISLQAGAIRKNIKVRDLLVELIR---MPRDQFNNIIDVDIKVARTELNRMGEE   
 6 GI|3875923|EMB|  95.8%  30.6%    DKLADIVTKMQSLARLVNGISLEIGFIDGSIPSDDAIAELLY---TDPSKLQEMMSVNSSVANRITNGFDTI   
 7 GI|2088697/1-69  95.8%  33.3%    KTLSDSLPNFKSLARLANGISLEIGLIDGSIPSDDAIAELLH---TGPVKLQEVINLNTTAIDTAITELENL   
 8 GI|2746880/1-72 100.0%  50.0%    EELSKSVNQMHMISRIINGIYLQQSLVNNTIPSEELISELLNIGSLTTSQIVGINGAKLTTVVDQINQLSTK   
 9 GI|474200/1-69   95.8%  18.1%    SDLQTVYSNLAIMSRITNAISLQAAAIRDSVNIRNVITELLE---ANTVLFSDLFNYDEKNLLKILTHISEE   
10 GI|474198/1-69   95.8%  19.4%    SSLEKVRDVLTMVARVTNAISLEAGAIRKTLKLTDVVSEVLD---IDPGKLDELLNLDSAGLNAHLEKMIHR   
11 GI|3874317|EMB|  97.2%  26.4%    DKWAVIISRIQMLSRIANGIYIQQELRDKSFVPDQFIAELFN--LGDSLSIDDIDDSDLGSALKSMDGMVSG   
12 GI|2088867/1-72 100.0%  38.9%    DELSTFIGQFRSMARLLTGISLQQGLAAGSIPPDELISEFLNIGTLTTTQVARIDPVKLTEMVQKVNTLSEP   
13 GI|2911870/1-69  95.8%  25.0%    YAYSLLMKRIPMLARVVSAISLYNGLVDNSIPSDEAITDLLN---IGGVKLKDLETFDKTKVDDVIAKWEEA   
14 GI|2315658/1-70  97.2%  29.2%    SALHDAIDKLSIVARVTNAITIQKGLNDKSMKVDNLLDELLN--ISPGDGFSYLQSLDVKKAKEGYIGIAKD   
15 GI|2291122/1-69  95.8%  18.1%    SGLEHVSENFRLLARVTNAISLQAAAIQQNLNLESILSEFLH---VHSSNLSAILDVDTNYVLSEMKKMAEL   
16 GI|3874861|EMB| 100.0%  25.0%    SALQQTVENFSSLSRLVNAISLQQALLDGSAKPNDVIAELLDIESGDAVAKLIGTEIDASKIRGNLDKTYEH   
17 GI|2746903/1-72 100.0%  52.8%    AEFSIMLDRIQMISRIATGIHLRHGITKGTIDSEELISEFLNFGTTTPAQITAISVDKLKGIVDGINRLREL   
18 GI|2315772/1-69  95.8%  26.4%    DPLGFSINLMQKISRIVNSIYLATELTAGTAKIYDLIAEFFN---FGPDSFNQLQSIDMKQLKSGLESIVSI   
19 GI|3979926|EMB|  95.8%  29.2%    TNPADFLNHITVVAHVSNGITLQAGLMNGSIPIVEVVDELLD---LGSAKVADLVSFKEDKITALVSKLKEV   
20 GI|474199/1-69   95.8%  18.1%    LPLRTILENLAVLARVTNAVSLTAALLQKTFPFRTIIGEIME---TEPSVVGEIAKHDPSQINSHLHRMLNR   
21 GI|3193164/1-69  95.8%  23.6%    TDLQTVTDNFHRLSRIANAIYLQAITIRKDINASQVIAEFLK---ISSEDLSKINNVNVRPTLEWLKALEIN   
22 GI|3319454|GB|A  95.8%  20.8%    EDPATLFKKLPAVARLITAIAIINGFSDGSIPADPVIAELLN---IDTASLQQLEKFNKTSVDKFMESLGSA   
23 GI|474198_1/1-6  95.8%  19.4%    PALVLAYNKLAIITRVTNAIVLQAEGIRKLVKVRDVVAELIR---SPNASFYDLMDVDPTNIFPVLNEIIEA   
24 GI|474199_1/1-6  95.8%  19.4%    SHLELAYETINKLSRVTLAIAYEAAAIQQSFKFRPALGELLE---ANLANLSTIITHNPLTVNNHLDGIVER   
25 GI|1707126/1-69  95.8%  25.0%    SKLDFTTEKLSRAARLFSSITLFNNLTSGHVDEDDLIAELLN---IETGNLGAVEKYNKSKADAFIKQYKDT   
26 GI|3193160/1-70  97.2%  23.6%    MKTNEVIARHVSLARVFNALYLQIQLSNGAFNEIDVSAGLWN--LKNSSTFDKLVHLKTYGLDEQLNILKES   
27 GI|1208856/1-68  94.4%  31.9%    TNFDGYLKHISVIAHVANGITLQAGLMNEKIPIDAVVGELFG---LRSIELSDIFYK-LDKIAAWTRKLKDI   
28 GI|2315574/1-70  97.2%  23.6%    SPVTEVISRHLAIGRVLNAIYLQMQLDNGTITQKDILAGIWN--LKNSSVIDKLVGLTDDGIKSNIIDLEKS   
29 GI|3878768|EMB|  91.7%  29.2%    FFSFKYIDRISTINNIAKGINLQTDLMNGKIPIDKVIGELLD------VKSSNIINFGSGKIIELTDQLKDI   
   consensus/100%                   .........h..hspl..ul.h...h.tt.h....h.sthh............h.......h...h..h...   
   consensus/90%                    ...t...tph..hu+lhsuI.l..th.ptph...thls-hhp........h.tl...p.t.h.t.htth.p.   
   consensus/80%                    ttht.hhppht.luRlhsuI.Lptthhptsh..pphlsElhp...hsssphttl.php.tth.t.hpth.p.   
   consensus/70%                    sthpthhpphphluRlsNuIsLptuhhptsl..cplluELLp...hsssphspl.shs.pth.p.lpphtp.