cov pid 1 [ . . . . : . . . 80 1 471855.Shel_22530_from_301_to_388 100.0% 100.0% SGYVLPDSSTHY-YT--QSEL-SGLSDWELYVARNEIYARHGRGFQ-NEDLRSYF-NSQSWYTEVYSPSEFDSMASPLND 2 195102.CPE0116_from_300_to_384 96.6% 43.2% YDFIMPYSNSSY-LS--ASDL-SKYNKSTLALMRNEIYARHGYVFN-TNPFKAYF-NSKSWYHP---DSSFKGDDSELND 3 288000.BBta_1810_from_283_to_363 92.0% 34.1% AEFVFPDSDQRL-LS--AADL-QGRTKDELRIARNEIFARRGRYFS-SPELTAYF-GRFSWYVP-------RTWDPVLNP 4 288000.BBta_1810_from_367_to_447 92.0% 35.2% SGFIFPDSDRRL-LT--AAEL-ARLSKAELRLAKNEIFARRGRFFD-APDLKAYF-GRFAWYVP-------STWNPTLTG 5 63737.Npun_F1910_from_407_to_492 97.7% 27.3% TANTYLWLSQRL-VN--DADL-DGKDGFELDIMRNSIFASHGRRFD-TPGLQDYF-DNLPWYKP--IYSPKAFPSKLLSK 6 240292.Ava_1700_from_403_to_488 97.7% 29.5% NNNNYLWLSQQA-VT--DADL-DGKDGYTLDIMRNTVFARHGRRFD-NPGLQDYF-NNQPWYNP--IYSPKEFPLKLLTR 7 498213.CLD_3411_from_302_to_386 96.6% 34.1% QGYIIPQSNQRY-LT--EDEL-KNYDKYTLDLIRNEIYARYGYAFK-EEPFKSYF-SNKNWYVK---DESFKGSDSELNE 8 405531.BCG9842_B4039_from_331_to_411 92.0% 40.9% NGFIFPDSDIRK-LT--STDL-AYLSKEQLKIARNEIYARHGHIFQ-TKDMQTYF-SKQSWYRE------NPYFTGKLTD 9 523794.Lebu_1594_from_307_to_387 92.0% 21.6% DDLTKAAYSAGY-LT--ADEL-KELTNEDLKIMRNYPYAVAGYDFS-DKKLKDYF-SKFLWYIP-------IGKNVELGE 10 297246.lpp2161_from_269_to_350 93.2% 29.5% YKVIYPWLNSD--DA--LGKL-ARLSNKELRFLRNTIYAQYGRQFQ-SPDLQEYF-SKKWWYVP-----NHDYSDRMLNE 11 523794.Lebu_1194_from_92_to_175 93.2% 22.7% LHKLINEVNSGD-----DSSL-SNYTKADLRILRNMVFAEKGFRIQ-KAGLKEYF-EQKSWYNP----YIDNQNDISLNI 12 209261.t3089_from_162_to_247 94.3% 24.2% LEGRFPEASRTW-LQVRSVQT-SATSIADLKIMLNEIYARHGYIFRpGGEMDRYF-RQQPWYRP-----RYANVDYLITE 13 526218.Sterm_3139_from_358_to_443 95.5% 22.2% DAIIEVRKETKQYL---AKDL-GKYSKEELRYIRNLPYALRGYSFK-DEKLQAYYKNKYKWYKP---EKYVEISDMVFTD 14 523794.Lebu_1595_from_314_to_394 90.9% 21.3% SDAGSTGTNLEYHL---EHYL-KNITDDELKIIRNYPYALAGYDFS-DKKLKDYF-SKFLWYIP-------TGKNVTLGK 15 523794.Lebu_0781_from_562_to_650 97.7% 23.1% LLSRVRQIKKKV-LSGDQNIL-KNYTPFGLQIIRNSFYAEHGYIFQkNQDMNEYF-NNLSGYEE--SNPDATTIEQNFSQ 16 523794.Lebu_1016_from_439_to_519 92.0% 21.6% ISYLASNLPSV------NFLI-ENFNSEELALLRNSIYAKYNRRFQ-TPRYSSYF-SRKTWYRG----EYDEVSERNFSQ 17 523794.Lebu_0261_from_302_to_386 95.5% 27.0% TNLALKGWSEGDKA---IKEL-DKLSTFQLEVLRNYPFAQYGHEFT-RKDLRNYF-SQFFWYEP---NKQVYVPEYIYED 18 292414.TM1040_1825_from_1_to_77 85.2% 16.7% MKYFLALLAMAAA----TPAL-ADSYCDDLWFTRNAIMDRAGYCFG-SSLGKHVFDNGDCI-----------GTSVTLSE 19 387093.SUN_0817_from_288_to_369 93.2% 19.3% RNNRLPFGIDQS-----LNIT-NSHDKTSYRILRNLPYARRGYVFK-TPEIRRYY-EAQPWYRP---NPSYKAALNKLTP 20 190304.FN1986_from_248_to_332 92.0% 20.7% KYFDIAARGNSYGDTGFIKEYQQdlNDKDLDIIRNYPYALAGYDFD-KKDLKDYF-SQFIWYSP-------VSKNVKIDS 21 460265.Mnod_4197_from_9_to_89 89.8% 17.8% SAILIGLAAAGALL---PFQA-SAQGCEELWYQRNRIFKEAGYCFR-TPRGIRTFGNAGCAYDD--------ERDVPLSV 22 526218.Sterm_4176_from_210_to_293 94.3% 21.3% TEINLEEIYNTKD----TSKL-SKLNEIELKILQNYPFAKDGYVFE-TPELKEYF-ENQSWYEP---STTLSNNEISIKN 23 440085.Mchl_2769_from_1_to_81 89.8% 22.2% MRFLVATVLASLTA---SPAL-AAFPCDELWGERNAIYKDAGYCFR-TERAIRAFGNSGCKYDE--------LADVPLSA 24 460265.Mnod_2301_from_12_to_87 85.2% 16.9% TCVLLSLAQ--------AGPA-FAQSCEEAWYQRNILFKEAGYCFK-TPRAIRTFGNAGCRYDD--------QADVPLSA 25 316057.RPD_0141_from_22_to_102 87.5% 22.5% ACLVIAGAGVT------TSPV-SAQSCQALWVERNSYYKEAGYCFK-TSRAIGYFGNRGCSYDY--------EGDVPLSV 26 400667.A1S_1679_from_7_to_80 83.0% 18.0% GMVTLAGFSA-------QAAT-PEQECQKLQDDYNLIYASKGFCFK-DQDAKEKYGNENCH-----------TTKPKFSD 27 246200.SPO3001_from_4_to_77 83.0% 18.0% LLLALLLALP-------LPAL-ADDGCHDLWFTRNLIMDRAGYCFG-STLGQAAFDNRGCI-----------GKSVSLGA 28 426117.M446_2936_from_9_to_89 89.8% 15.6% TLALAGLACAAALS---PVQA-FAQGCEELWYQRNRIFKEAGYCFR-TPRGIRAFGNAGCLYDD--------ERQVPLSA 29 426355.Mrad2831_0561_from_6_to_80 84.1% 18.0% YALILVAG---------PTGV-MADDCAEAWYQRNLIYKQAGYCFS-TPRAIRTFGNADCRYDA--------MDRVPLSR 30 78245.Xaut_2366_from_12_to_91 87.5% 22.0% AGALLPGalpALAPAAHAQAL-SELSCRALWVQRNAVYAERGYCFK-TADAIATF-GERCF-----------PPYGQLTP 31 292414.TM1040_3803_from_22_to_97 85.2% 14.6% TMKALVLTAALTC----TAGT-ASALCEDAWYLRNMAFDRAGYCFG-SALGKSVF-SAECS-----------TKSPSLND 32 290400.Jann_3882_from_2_to_80 87.5% 15.6% IRIAVLLALTGFTGP--ASAQ-NSSFCQELWLSRNTVMDRAGQCFG-TPLGQAVFDNSDCV-----------EGGLRLTP 33 526218.Sterm_3139_from_282_to_356 84.1% 19.1% YKDDLTYLYGRIY----NQDI-YARNEEELRILRNYPYAAAGYDFS-DPGLKKYF-SQFFWYIP-------ISKDVKVSA consensus/100% ............................th....N..ht..s..ht.t..h.tha.tt...................ht. consensus/90% ....h...............h..t..t.ph.h.+N..at.hGh.Ft.p..h.thF.pt..h.............t..hs. consensus/80% .thhh..h..t........th.tt.sp.pL.h.RN..asptGh.Fp.s.th.thF.st..hY............p..ls. consensus/70% hthhhs.httt......tstl.tthsptcLhhhRN.hasptGatFp.s.thpphF.sp.shY............ph.Lst cov pid 81 . ] 94 1 471855.Shel_22530_from_301_to_388 100.0% 100.0% CEKANAETIKSVEQ 2 195102.CPE0116_from_300_to_384 96.6% 43.2% YEVKNVQTIKSVEN 3 288000.BBta_1810_from_283_to_363 92.0% 34.1% VEAANVDLLDRAEN 4 288000.BBta_1810_from_367_to_447 92.0% 35.2% VEETNVKLIDQMSR 5 63737.Npun_F1910_from_407_to_492 97.7% 27.3% LEQQNIEYINKYQE 6 240292.Ava_1700_from_403_to_488 97.7% 29.5% LEQRNVDYIAAYQK 7 498213.CLD_3411_from_302_to_386 96.6% 34.1% HELKNIKLLLELSS 8 405531.BCG9842_B4039_from_331_to_411 92.0% 40.9% IETYNVELIK-SRE 9 523794.Lebu_1594_from_307_to_387 92.0% 21.6% DDYEVVNNVDKIIK 10 297246.lpp2161_from_269_to_350 93.2% 29.5% EDKKLLSMINQANK 11 523794.Lebu_1194_from_92_to_175 93.2% 22.7% KEKRFLKAVQKYEE 12 209261.t3089_from_162_to_247 94.3% 24.2% TEHRNIKLLKELLS 13 526218.Sterm_3139_from_358_to_443 95.5% 22.2% DENLLIDKINKISE 14 523794.Lebu_1595_from_314_to_394 90.9% 21.3% DEYEWIKKADNIIN 15 523794.Lebu_0781_from_562_to_650 97.7% 23.1% EDRNFINIVRTMEK 16 523794.Lebu_1016_from_439_to_519 92.0% 21.6% DEFDLLNNILIAEG 17 523794.Lebu_0261_from_302_to_386 95.5% 27.0% RVKIIDEILKKRKK 18 292414.TM1040_1825_from_1_to_77 85.2% 16.7% MDATRVAKLKAQER 19 387093.SUN_0817_from_288_to_369 93.2% 19.3% QEKEWLKKLT-IGD 20 190304.FN1986_from_248_to_332 92.0% 20.7% DSNNIIKAVDEINT 21 460265.Mnod_4197_from_9_to_89 89.8% 17.8% RQRDAVAAIRETER 22 526218.Sterm_4176_from_210_to_293 94.3% 21.3% KDDEWFIYMKKYNN 23 440085.Mchl_2769_from_1_to_81 89.8% 22.2% RQRADIADIQRQER 24 460265.Mnod_2301_from_12_to_87 85.2% 16.9% RQRAAIAEIQAFER 25 316057.RPD_0141_from_22_to_102 87.5% 22.5% NIRDRIAEIKAMER 26 400667.A1S_1679_from_7_to_80 83.0% 18.0% KEQQRLDAIKERQK 27 246200.SPO3001_from_4_to_77 83.0% 18.0% AEQRLVAHIRALEQ 28 426117.M446_2936_from_9_to_89 89.8% 15.6% NQREAVTAIRRTES 29 426355.Mrad2831_0561_from_6_to_80 84.1% 18.0% QEQATVADLQAFER 30 78245.Xaut_2366_from_12_to_91 87.5% 22.0% SQQRYVDEVKAWEA 31 292414.TM1040_3803_from_22_to_97 85.2% 14.6% WDQRMVSAHKQLEA 32 290400.Jann_3882_from_2_to_80 87.5% 15.6% MDAEIVRLAQQTED 33 526218.Sterm_3139_from_282_to_356 84.1% 19.1% EEAETFR-----EK consensus/100% .............t consensus/90% .p.t.ht.ht..tp consensus/80% .ptt.lt.lpthpp consensus/70% t-pp.lphlpthpp