cov pid 1 [ . . . . : . . . 80 1 Q9LWM2/169-224 100.0% 100.0% TKTSK-VWDDFEE---------------LYETTNGNRV-RVFAKCNY--CHKTLSARSS------AGTGHLLRHIK--SC 2 Q9LWI2/72-127 100.0% 98.2% TKTSK-VWDDFEE---------------LYETTNGNRV-RVSAKCNY--CHKTLSARSS------AGTGHLLRHIK--SC 3 Q9LWH2/361-416 100.0% 78.6% RSRSE-VWDDFEE---------------LFEERNGAQV-RVSAKCNY--CHKTLSARST------GGTGHLLRHIK--SC 4 Q9FE76/65-120 100.0% 44.6% SRTSG-VWQHFDE---------------VAMTGPDGRQ-VTFARCRI--CKNKLSAKSS------GGTGHLKRHAE--AC 5 Q9ZPF6/105-161 100.0% 21.1% KQYAD-CWEHFTL---------------IWKKDKTGKA-VERAQCKH--CKNDYAYDPH-----KNGTKSYNRHLE--KC 6 BAB32935/79-13 100.0% 48.2% SRTSG-VWQSFDE---------------IKETCPDGRE-VSKARCRI--CRQILSARSS------GGTGHLKRHAE--SC 7 12321083/31-83 94.6% 26.8% KQRAL-CWDEFTS---------------VGIEEDGK----ERARCHH--CGIKLVVEKS------YGTSTMNRHLT--LC 8 Q9M3F0/48-97 89.3% 33.9% SQRSF-VWDHYTR-----------------FEDNPK-----RCKCNY--CHRTYGCDSK------DGTSNLKNHLR--IC 9 Q9LH75/15-65 91.1% 35.7% RLTSV-VWNYFER---------------VRKAD------VCYAVCIQ--CNKKLSGSSN------SGTTHLRNHLM--RC 10 O48647/140-193 96.4% 37.5% KKRSK-AWEHFTT---------------VEFTADGK---DSKARCKY--CHKDLCCTSK------NGTSALRNHLN--VC 11 Q9S7T4/42-98 92.9% 32.8% RKKSD-VWNHFT----------------VETVSPGS----AKACCNH--CRKSFAYINGQ---KLAGTSHLKRHIQLGIC 12 O23600/418-471 96.4% 28.6% RLKSD-VWKEFRP---------------ILELEEDG---KQRGRCIH--CDKKLIIEIS------QGTSALKCHLQ--IC 13 12325234/26-76 91.1% 33.9% RLKSV-VWNDFDR---------------VRKGE------TYIAICRH--CKKRLSGSSA------SGTSHLRNHLI--RC 14 O75132/285-338 89.3% 23.3% RRRSA-VWKHFYL----------------SPLDNSK------AVCIH--CMNEFSRGKNG---KDLGTSCLIRHMWR-AH 15 O82332/59-109 89.3% 35.1% SSRSY-VWDHFSR-----------------KKGNPN-----KCNCHY--CGKELACPSK------SGTSTLKKHLEL-SC 16 Q9LGZ1/95-152 100.0% 22.4% GKRAE-CWKHFKVI-------------NVPSKKERGVM-VAKAKCKF--CHRSYVYHPG------GATTTLNRHLA--GC 17 O65237/46-96 89.3% 29.8% KVRSW-VWDHFTK----------------LSND------VNHCNCNY--CGKELACSTK------SGTSTLKKHLLN-IC 18 O75132/456-508 89.3% 23.7% RLKSE-VWHHFSL----------------APMDSLK------AECRY--CGCAISRGKKG----DVGTSCLMRHLYR-RH 19 Q9S9W0/35-85 91.1% 30.4% SRTSD-MWDYFTL-----------------EDENDG----KIAYCKK--CLKPYPILPT------TGTSNLIRHHR--KC 20 Q9LZN8/28-78 89.3% 26.3% PTRST-AWKVFTR-----------------LKDDDN-----SCSCNY--CGKIYSCNPA-----TCGTSNMNTHMR--KC 21 AAH03536/51-10 98.2% 23.7% TRFSE-AWEYFHL----------------APARAGHHP-NQYATCRL--CGRQVSRGPGV----NVGTTALWKHLKS-MH 22 O75132/558-611 89.3% 26.7% KKTSK-LWNHFS----------------ICSADSTK------VVCLH--CGRTISRGKKP---TNLGTSCLLRHLQR-FH 23 T02916/138-199 100.0% 25.8% KCTSD-VWQHFTKK------------EIEVEVDGKKYV-QVWGHCNFPNCKAKYRAEGH------HGTSGFRNHLRT-SH 24 TRA9_MAIZ/83-1 100.0% 25.8% KCTSD-VWQHFTKK------------EIEVEVDGKKYV-QVWGHCNFPNCKAKYRAEGH------HGTSGFRNHLRT-SH 25 12854464/146-1 89.3% 23.7% RLKSE-VWHHFSL----------------APMDSLK------AVCQY--CSCIISRGKKG----DVGTSCLMRHLYR-RH 26 Q94513/4-60 89.3% 20.6% GRVSN-VWQHYD----------------INEEC------ENFAICRY--CGNNISRGGMASNLKGNNTTNLWTHLRH-KH 27 Q9VM61/3-50 83.9% 29.8% KKKSN-VWQYFYK------------------TSG------TVATCLL--CNRNYSRRG-------RGTTCLRNHLKS-KH 28 Q24260/27-79 94.6% 28.6% NTKSC-VWRFFNL---------------VQCDDHI----EPYACCKT--CGDLLSYSGK------TGTGSLLRHRC--LH 29 Q9LS83/57-110 96.4% 28.6% RLKSD-VWKEFRP---------------ILELEEDG---KQRGRCIH--YDKKLIIENS------QGTSALKRHLQ--IC 30 Q21374/1-49 85.7% 26.3% MVKSR-VWDYFLK----------------LQDG--------RNKCNL--CNKILARGSR------GSTHNLISHLTR-VH 31 Q9LMZ8/141-194 94.6% 24.6% RFRAA-CWKNFDR---------------GQKYPNGK----TEVTCKY--CEQTYHLNLR-----RNGTNTMNRHMR--SC 32 Q9LM27/225-278 94.6% 24.6% RFRAA-CWKNFDR---------------GQKYPNGK----TEVTCKY--CEQTYHLNLR-----RNGTNTMNRHMR--SC 33 O24134/142-193 87.5% 32.2% LETSL-VWNFFTQ---------------VRRKN--------KAKCKT--CGKLMSHKYVG---DRSGTGSLTRHIK--TH 34 Q38743/126-175 87.5% 33.3% TKKAT-VWKWFSK------------------VTGSN-----WAQCLL--CPTRYSHKTG------CGTGTLTRHLTA-KH 35 Q19787/123-171 87.5% 32.1% VKTAK-VWRYFDE---------------LPTIE-------QAAECRI--CRKKIKATN-------SSTTGMIRHLR--SC 36 YG2D_YEAS/84-1 89.3% 17.5% KNIAK-FWSHFLA---------------IEKKL-------TKVKCKH--CGEILTRSDA------SLTKTFRSHLKT-KH 37 O96084/30-84 82.1% 18.5% KMKSV-YWRYFGFPSND-------NDEVITKQN---------VVCIK--CHKVLTNH--------GNTTNLRAHLQH-RH 38 Q94883/32-86 82.1% 18.5% KMKSV-YWRYFGFPSND-------NNEVITKQN---------VVCIK--CHKVLTNH--------GNTTNLRAHLQH-RH 39 O75132/115-168 89.3% 23.3% RKKSP-AWKHFF----------------ISPRDSTK------AICMY--CVKEFSRGKNE---KDLSTSCLMRHVRR-AH 40 Q9M2N5/65-121 92.9% 29.5% KKKSM-VWEHFT----------------IEAVEPNCR----RAFCKG--CNQSFAYSNGN---KVAGTSHLKRHIFKGTC 41 Q9XTZ7/55-102 83.9% 28.1% KGRSI-VWEHXTW---------------VAESQ--------RAACNY--CAAEFQVK--------GGTSALLRHLKT-IH 42 Q9VEP0/3-49 82.1% 26.3% RKTSE-IWCFFRA-----------------VDD-------TFAVCNI--CKAKLSYK--------TTTTNLSKHMNR-MH 43 Q9VJW2/4-49 82.1% 19.6% MSRSR-IWKFYDK------------------LD------RNSAQCQL--CEKVIKTS--------GNTSNLMKHMK--TH 44 O96006/20-74 83.9% 15.6% RAKSK-VWKYFGFDTN--------AEGCILQWK--------KIYCRI--CMAQIAYS--------GNTSNLSYHLEK-NH 45 Q9XWZ9/350-398 85.7% 24.6% KKTSE-IWEHYKC---------------LNEKQN--------VECIY--CWKVLKRND-------SSTKSMWGHMNA-YH 46 Q9FZ78/104-151 83.9% 24.6% TMTSV-YLKYFET----------------APDSKT-------RKCKF--CGQSYSIA--------TATGNLGRHLTN-RH 47 BAB39883/41-88 83.9% 19.3% TMKSL-YLQFFDT------------------APDGK-----SRVCKL--CKKSYCMT--------TATGNLGKHLNN-RH 48 Q25239/21-75 92.9% 23.2% HSRSK-IWEFFCQ---------------IEKED-GKII-DGLVICEK--CNRILKYNG-------KQTSNLIRHN----C 49 O96691/24-76 94.6% 26.8% KGRSF-VWNILSE---------------ILKPD-GTLL-EGFVYCRT--CLKVLKYYN-------GQTSNLIRHPC---C 50 Q9VAF2/117-163 82.1% 29.8% GKNNK-LWAHFIR---------------ISEFM---------AKCMH--CGKTLSSK--------HSSSNLMRHIVR-RH 51 Q9VW40/25-77 94.6% 19.6% STRST-VWRVYRK---------------IKKDD-GSFL-EHVLFCIG--CRSIMSFTH-------KSTTNLRRHRC---H 52 Q9NJY8/110-153 76.8% 19.3% KEVTN-RWHHFHS-----------------HTA-------QRSMCPY--CPATYSRID-----------TLRSHLRV-KH 53 2773138/725-76 76.8% 19.3% KEVTN-RWHHFHS-----------------HTA-------QRSMCPY--CPATYSRID-----------TLRSHLRV-KH 54 AAH01791/405-4 73.2% 14.3% SNLSG-HLRTHTE-----------------EKA---------CECKI--CGKVFGYP-----------SCLNNHMR--TH 55 12847366/33-91 98.2% 18.3% PSYSE-AWGYFHL----------------DPAQPRHRMMSAWATCRL--CGLQVGGLPNF----QMWTRALCQHLSD-VH 56 Q25438/25-77 94.6% 21.4% KGTSF-IWNVLAD---------------IQKEDDTLV--EGWVFCRK--CEKVLKYTT-------RQTSNLCRHKC---C consensus/100% ...s..hht...................................C....h...h...............th..H.....p consensus/90% ..hu..hWp.a.....................t.........s.C.h..C.t.hth..........tTtth.pHh....p consensus/80% p.pS..hWphFp....................t.........shC.h..Ctp.htht........tsTssLhpHhp...p consensus/70% ptpSt.sWpaFp....................s.........shCph..Ctp.hsht........tuTssLhpHlp..hp cov pid 81 ] 83 1 Q9LWM2/169-224 100.0% 100.0% KPR 2 Q9LWI2/72-127 100.0% 98.2% KPR 3 Q9LWH2/361-416 100.0% 78.6% KPR 4 Q9FE76/65-120 100.0% 44.6% AKK 5 Q9ZPF6/105-161 100.0% 21.1% KIR 6 BAB32935/79-13 100.0% 48.2% AKK 7 12321083/31-83 94.6% 26.8% PER 8 Q9M3F0/48-97 89.3% 33.9% KHY 9 Q9LH75/15-65 91.1% 35.7% LKR 10 O48647/140-193 96.4% 37.5% KRK 11 Q9S7T4/42-98 92.9% 32.8% PMN 12 O23600/418-471 96.4% 28.6% QKR 13 12325234/26-76 91.1% 33.9% RRR 14 O75132/285-338 89.3% 23.3% RAI 15 O82332/59-109 89.3% 35.1% KAF 16 Q9LGZ1/95-152 100.0% 22.4% TQY 17 O65237/46-96 89.3% 29.8% KAY 18 O75132/456-508 89.3% 23.7% PEV 19 Q9S9W0/35-85 91.1% 30.4% SMG 20 Q9LZN8/28-78 89.3% 26.3% KAY 21 AAH03536/51-10 98.2% 23.7% REE 22 O75132/558-611 89.3% 26.7% SNV 23 T02916/138-199 100.0% 25.8% SLV 24 TRA9_MAIZ/83-1 100.0% 25.8% SLV 25 12854464/146-1 89.3% 23.7% TEV 26 Q94513/4-60 89.3% 20.6% RDE 27 Q9VM61/3-50 83.9% 29.8% PPE 28 Q24260/27-79 94.6% 28.6% SSS 29 Q9LS83/57-110 96.4% 28.6% QKR 30 Q21374/1-49 85.7% 26.3% PKE 31 Q9LMZ8/141-194 94.6% 24.6% EKT 32 Q9LM27/225-278 94.6% 24.6% EKT 33 O24134/142-193 87.5% 32.2% PRD 34 Q38743/126-175 87.5% 33.3% KNR 35 Q19787/123-171 87.5% 32.1% HVQ 36 YG2D_YEAS/84-1 89.3% 17.5% NIS 37 O96084/30-84 82.1% 18.5% KDL 38 Q94883/32-86 82.1% 18.5% KDL 39 O75132/115-168 89.3% 23.3% PTV 40 Q9M2N5/65-121 92.9% 29.5% PAL 41 Q9XTZ7/55-102 83.9% 28.1% PAA 42 Q9VEP0/3-49 82.1% 26.3% PTS 43 Q9VJW2/4-49 82.1% 19.6% PQI 44 O96006/20-74 83.9% 15.6% PEE 45 Q9XWZ9/350-398 85.7% 24.6% QDI 46 Q9FZ78/104-151 83.9% 24.6% PGY 47 BAB39883/41-88 83.9% 19.3% PGY 48 Q25239/21-75 92.9% 23.2% YVA 49 O96691/24-76 94.6% 26.8% RNI 50 Q9VAF2/117-163 82.1% 29.8% TSL 51 Q9VW40/25-77 94.6% 19.6% LQY 52 Q9NJY8/110-153 76.8% 19.3% PDR 53 2773138/725-76 76.8% 19.3% PDR 54 AAH01791/405-4 73.2% 14.3% SAQ 55 12847366/33-91 98.2% 18.3% LPE 56 Q25438/25-77 94.6% 21.4% ASL consensus/100% ... consensus/90% ... consensus/80% ... consensus/70% .th