cov    pid  1 [        .         .         .        ] 39
  1 TTP_BOVIN/13-4 100.0% 100.0%    RYKTELCRTF---SESG-------RCRYGA-KCQFAHGL   
  2 32|O93432/13-4 100.0%  64.3%    RYKTELCSRY---AETG-------TCKYAE-RCQFAHGL   
  3 TISB_MOUSE/13- 100.0%  75.0%    RYKTELCRPF---EENG-------ACKYGD-KCQFAHGI   
  4 55|Q20155/13-4 100.0%  60.7%    LYKTELCRSW---MDHG-------RCNYGE-RCQYAHGE   
  5 91|O45491/13-4 100.0%  57.1%    KYKTVLCDNF---SRTG-------HCKYGT-KCQFIHRA   
  6 67|Q20667/13-4 100.0%  53.6%    KYKTVLCDKF---SMTG-------NCKYGT-RCQFIHKI   
  7 CTH1_YEAST/13- 100.0%  67.9%    LYKTELCESF---TIKG-------YCKYGN-KCQFAHGL   
  8 55|Q20155_1/13 100.0%  50.0%    KYKTEACQSF---HQSG-------YCPYGP-RCHFIHNE   
  9 09|O16809/13-4 100.0%  57.1%    KYKTELCRTF---HTIG-------FCPYGP-RCHFIHND   
 10 ZFS1_SCHPO/13- 100.0%  64.3%    LYKTEPCKNW---QISG-------TCRYGS-KCQFAHGN   
 11 24|P92024/13-4 100.0%  57.1%    KYKTQLCDKF---SNFG-------QCPYGP-RCQFIHKL   
 12 24|P92024_1/13 100.0%  53.6%    AFKTALCDAF---KRSG-------SCPYGE-ACRFAHGE   
 13 72|O48772/13-3  96.4%  32.1%    SER-AECRFF---MNTG-------TCKYGD-DCKYSHPK   
 14 93|O45493/13-4 100.0%  53.6%    NYKTVLCNNF---STTG-------HCKYGI-RCQFIHRS   
 15 77|Q17877/13-4 100.0%  42.9%    KYKTKLCDKY---TTTG-------LCPYGK-RCLFIHPD   
 16 97|O82297/13-4 100.0%  39.3%    NWKTRICNKW---QTTG-------YCPFGS-HCHFAHGP   
 17 89|O02289/13-4 100.0%  42.9%    KPKTKICDHW---RRSG-------SCSYGD-ACWYAHGE   
 18 TTP_MOUSE_1/13 100.0%  53.6%    KYKTELCHKF---YLQG-------RCPYGS-RCHFIHNP   
 19 52|O82252/13-4 100.0%  32.1%    RFGEPPCQFY---LKTG-------TCKFGA-SCKFHHPK   
 20 51|O18251_1/13 100.0%  46.4%    AFKTALCKTF---QLTK-------ACSYGE-QCKFAHSV   
 21 E321898_1/13-4 100.0%  57.1%    KYKTELCRTY---HTAG-------YCVYGT-RCLFVHNL   
 22 YL23_YEAST/13- 100.0%  28.6%    DFQPDVCKDY---KQTG-------YCGYGD-SCKFLHSR   
 23 67|Q20667_1/13 100.0%  46.4%    AFKTALCDAY---KRSQ-------ACSYGD-QCRFAHGV   
 24 Z183_HUMAN/13- 100.0%  32.1%    DYQPDICKDY---KETG-------FCGFGD-SCKFLHDR   
 25 PIE1_CAEEL/13-  92.9%  39.3%    NRR-QICHNF----ERG-------NCRYGP-RCRFIHVE   
 26 64|Q60764/13-3  96.4%  35.7%    WTKQILCRYY----LHG-------QCKEGD-NCRYSHDL   
 27 6|S71796_1/13- 100.0%  46.4%    EYKTRLCDAF---RREG-------YCPYND-NCTYAHGQ   
 28 37|O19137/13-3  96.4%  32.1%    GEKTVVCKHW----LRG-------LCKKGD-QCEFLHEY   
 29 CTH1_YEAST_1/1 100.0%  42.9%    NYRTKPCINW---SKLG-------YCPYGK-RCCFKHGD   
 30 34|Q13434/13-3  96.4%  35.7%    WTKQVTCRYF----KYG-------ICKEGD-NCRYSHDL   
 31 72|O48772_1/13 100.0%  35.7%    RPGERDCQFF---LRTG-------QCGYGN-SCRYNHPL   
 32 ZFS1_SCHPO_1/1 100.0%  46.4%    KYKSERCRSF---MMYG-------YCPYGL-RCCFLHDE   
 33 77|Q17877_1/13 100.0%  42.9%    SYKTVICQAW---LESK-------TCSFAD-NCRFAHGE   
 34 51|O77151/13-3  96.4%  46.4%    NYKRALCRHW----MRG-------YCWLEA-DCKFAHGE   
 35 E310016/13-42  100.0%  43.3%    KYKTKLCKNF---ARGGT-----GFCPYGL-RCEFVHPT   
 36 37|O19137_1/13  92.9%  25.0%    TRR-VICVNY----LVG-------FCPEGP-SCKFMHPR   
 37 88|O74488/13-3  96.4%  32.1%    NLQHVPCKFF----RNG-------TCTAGE-NCPFSHSL   
 38 63|Q14163/13-3  96.4%  32.1%    KRK-EYCMYY---NRFG-------RCNRGE-RCPYIHDP   
 39 01|Q06701/13-3  96.4%  32.1%    DYSHVPCKFF----KMG-------NCQAGS-SCPFSHSP   
 40 52|O82252_1/13 100.0%  28.6%    RPGAPDCAYY---MRTG-------VCGYGN-RCRYNHPR   
 41 52|O82252_2/13 100.0%  28.6%    RPGEPECQYY---LKTG-------DCKFGT-SCKFHHPR   
 42 03|O76103/13-3  96.4%  35.7%    RLKTFPCKRF----KEG-------TCQRGD-QCCYSHSP   
 43 02|Q06102/13-4 100.0%  32.1%    LRKMPECVFF---SKNG-------YCTQSP-DCQYLHID   
 44 63|Q14163_1/13  96.4%  42.9%    SRKAEVCSDF----LKG-------YCPLGA-KCKKKHTL   
 45 18|Q93618/13-3  96.4%  46.4%    DPKSLLCVFF----KQG-------LCGKGA-KCKFSHDL   
 46 89|O02289_1/13  96.4%  28.6%    SFL-EPCDFF---AATG-------SCPFGD-ACHQSHSI   
 47 72|O48772_2/13 100.0%  35.7%    RPGQPACGNF---KAYG-------FCKFGA-NCKFDHSM   
 48 36|Q19336_1/13  92.9%  32.1%    RRR-AVCPNY----LAG-------FCLQGP-DCQYAHPS   
 49 88|O74488_1/13  92.9%  32.1%    TER-PICKYF----LKG-------NCKFGP-KCALSHAL   
 50 11|O43311/13-3  92.9%  34.5%    DRL-EVCREY----QRG-------NCNRGENDCRFAHPA   
 51 72|O48772_3/13 100.0%  32.1%    RQGEKPCPYY---MQTG-------LCRFGV-ACKFHHPH   
 52 70|Q23170/13-3  92.9%  35.7%    KSK-FTCKNY----LKG-------KCRFGD-KCRFSHPV   
 53 G4249418_1/13- 100.0%  28.6%    RPGVQRCTFY---VQNG-------FCKFGS-TCKFDHPM   
 54 G3779240/13-40  96.4%  41.4%    TDKLEVCREF----QRG-------NCARGETDCRFAHPA   
 55 |SPAC3A11_2/13  92.9%  35.7%    TEK-TICKYF----QKG-------NCKFGS-KCALEHVL   
 56 52|O82252_4/13 100.0%  28.6%    REGDNECSYY---LKTG-------QCKFGI-TCKFHHPQ   
 57 23|O74823/13-4 100.0%  32.1%    SPSAVYCRYY---NANG-------ICGKGA-ACRFVHEP   
 58 00|Q12000/13-3  96.4%  42.9%    DPKSMVCALF----KLG-------NCNKGA-KCKFSHDL   
 59 81|Q24081_1/13  92.9%  21.4%    LRR-VLCMDY----LAG-------FCPEAP-SCKHMHPH   
 60 Y054_HUMAN/13- 100.0%  46.4%    SEEYTLCKRF---LEQG-------ICRYGA-QCTSAHSQ   
 61 05|Q22805/13-3  92.9%  28.6%    TEH-QICKFF----REG-------YCRDGD-NCLYSHQA   
 62 34|Q13434_1/13  96.4%  39.3%    ETKKQLCP-Y---AAVG-------QCRYGE-NCVYLHGD   
 63 |SPAC3A11_2_1/  96.4%  32.1%    SLQHVPCKFF----RQG-------TCTSGK-NCIFSHDL   
 64 97|O82297_1/13  96.4%  44.8%    FFKTKLCFKF----RAG-------TCPYSASSCHFAHSA   
 65 G3779240_1/13-  92.9%  34.5%    LTL-EVCRQF----QRG-------TCSRSDEECKFAHPP   
 66 54|Q10954/13-3  96.4%  32.1%    SSR-RRCKDF---EERG-------YCIRGD-QCPYYHGR   
 67 U2R2_MOUSE/13-  96.4%  35.7%    RWKMAICGLF----EVQ-------QCPRGK-HCNFLHVF   
 68 YP25_CAEEL_1/1  96.4%  50.0%    NFKTRLCMTH----AAGI-----NPCALGA-RCKFAHGL   
 69 |HSU2AF1RA_1_1  96.4%  28.6%    KDR-ANCPFY---SKTG-------ACRFGD-RCSRKHNF   
 70 93|O45493_1/13  96.4%  44.8%    AFKTSLCGFH----RRG------QKCAYGE-KCKFAHSV   
 71 43|O22243/13-3  92.9%  32.1%    GEA-PVCVYF----LNG-------YCNRGG-QCTFTHTL   
 72 63|Q14163_2/13  92.9%  25.0%    KEKMPVCSYF----LKG-------ICS-NS-NCPYSHVY   
 73 E310016_1/13-4  96.4%  53.3%    NYKTRLCMMH----ASGI-----KPCDMGA-RCKFAHGL   
 74 |S69507_1/13-3  96.4%  28.6%    KYR-PSCPFY---NKTG-------ACRFGN-RCSRKHDF   
 75 G3980378/13-39  96.4%  28.6%    RNRAHICSFF----IRG-------ECTRGD-ECPYRHEM   
 76 50|Q94250/13-4  96.4%  34.5%    WLQVEVCREF----LRG-------QCARSDQECKFAHPP   
 77 99|Q02799_1/13  89.3%  35.7%    NNL--PCKYF----AKG-------NCKFGN-KCVNAHVL   
 78 64|Q60764_1/13  92.9%  32.1%    MPL-PLCR-Y---AARG-------QCLRGD-RCAYPHGE   
 79 05|Q22805_1/13  96.4%  25.0%    LRRPVLCNFY----ANS-------FCKKGL-QCLMLHGE   
 80 02|Q06102_1/13  96.4%  28.6%    ASKIPKCENY----EMG-------FCPLGS-SCPRRHIK   
 81 43|O22243_1/13  96.4%  32.1%    STR-PACKFF---ASSQ-------GCRNGE-SCLFSHAM   
 82 23|O74823_1/13  92.9%  32.1%    TRK-TICPKF----LNG-------RCNKAE-DCNLSHEL   
 83 U2AG_DROME/13-  96.4%  28.6%    KDK-VNCSFY---FKIG-------ACRHGD-RCSRIHNK   
 84 55|P93755/13-3  96.4%  39.3%    HYSCVPCPDF----RKG-------ACRRGD-MCEYAHGV   
 85 G4204308/13-40 100.0%  42.9%    QYSGEVCPEF---RRGG-------DCSRGD-DCEFAHGV   
 86 23|O74823_2/13 100.0%  28.6%    SENAPICFEF---AKYG-------FCELGT-SCKNQHIL   
 87 02|Q06102_2/13  92.9%  25.0%    QNK-IVCRHW----LRG-------LCKKND-QCEYLHEY   
 88 00|O55000/13-3  96.4%  35.7%    SNR-PVCRHF---MMKG-------NCRYEN-NCAFYHPG   
 89 E1340244_1/13-  96.4%  32.1%    DFREATCRQF---EEN--------SCNRGG-YCNFMHVK   
 90 G4096748/13-39  96.4%  25.0%    RNRPHICSFW----VKG-------ECKRGE-ECPYRHEK   
 91 34|Q13434_2/13  92.9%  28.6%    LCG-VVCKYF----QRG-------CCVYGD-RCRCEHSK   
 92 G4098572_2/13-  96.4%  25.0%    KSGAAVCEFF---LKA--------ACGKGG-MCPFRHIS   
 93 22|P79522/13-3  96.4%  35.7%    SDR-PVCRHF---AKKG-------HCRYED-LCAFYHPG   
 94 30|O54930_3/13  96.4%  28.6%    MTKMPECYFY---SKFG-------ECS-NK-ECPFLHID   
 95 99|O82199/13-3  96.4%  35.7%    HYSGTACPEF----RKG-------CCKRGD-ACEFSHGV   
 96 64|Q13064_1/13  89.3%  30.0%    SNK--ACRYF----AEGR-----GNCPFGD-TCFYKHEY   
 97 VMA2_TRTV/13-3  92.9%  28.6%    SRR-NPCR-Y---EIRG-------KCNRGS-SCTFNHNY   
 98 VMA2_HRSVA/13-  92.9%  28.6%    SRR-NPCK-F---EIRG-------HCLNGK-RCHFSHNY   
 99 16|O65616/13-3  89.3%  35.7%    TEK--LCKFW----VDG-------NCPYGD-KCRYLHCW   
100 34|Q13434_3/13  89.3%  26.7%    SNK--ACKYF----DEGR-----GSCPFGE-NCFYKHMY   
101 74|O02174/13-4  96.4%  34.5%    KIP-EPCVYF--ISRPG-------GCNRGD-QCRFIHDE   
102 04|O15504/13-3  85.7%  36.0%    ---MAICQFF----LQG-------RCRFGD-RCWNEHPG   
103 G4204470_1/13-  96.4%  32.1%    DFREACCRQY----EMG-------ECTRGG-FCNFMHLK   
104 97|O43797_2/13  89.3%  25.0%    NTV-TVCMDY----IKG-------RCSRE--KCKYFHPP   
105 02|Q06102_3/13  96.4%  25.8%    PDR-PICEFY--NSREGP-----KSCPRGP-LCPKKHVL   
106 63|Q14163_3/13  82.1%  43.5%    -----LCPDF---ARRG-------ACPRGA-QCQLLHRT   
107 36|Q19336_2/13  89.3%  28.6%    ETKMKDCPWY----DRG-------FCRHGP-YCK--HRH   
108 72|O48772_4/13  85.7%  28.6%    RVGQPDCE-------TG-------ACKYGP-TCKYHHPK   
109 81|Q98881_4/13  89.3%  25.0%    ESKIKDCPWY----DRG-------FCKHGP-DCR--HRH   
110 23|O74823_3/13  92.9%  25.0%    PRRIPACRYF----LLG-------KCN-NP-NCRYVHIH   
111 63|Q14163_4/13  92.9%  28.6%    -EKVAVCTRF----VRG-------TCKKTDGTCPFSHHV   
112 57|Q91457/13-3  89.3%  30.0%    SKK--ACKYF----DQGR-----GSCPFGG-KCLYLHAF   
113 81|Q24081_2/13  89.3%  28.6%    QSKVKDCPWY----KRG-------FCRHGP-HCR--HQH   
114 8|JC6068_1/13-  96.4%  28.6%    DFR-EACCRQ---HETS-------ECQRGG-LCNFMHAK   
115 64|Q60764_2/13  89.3%  30.0%    SQK--ACRYF----AGGL-----GHCPFGE-FCFYKHEY   
116 G4038036/13-40  92.9%  20.0%    KWN-TDCVYF----LASP-----LTCKKGP-ECEYRHSE   
117 57|Q91457_1/13  96.4%  28.6%    QNLPQLCP-Y---AANG-------HCFYEE-NCTYLHGD   
118 02|Q06102_4/13  85.7%  25.9%    --K-VFCQRY----MTG-------FCPLGKDECDMEHPQ   
119 G4038036_1/13-  96.4%  28.6%    AKQPVPCLFF----QKG-------MCMKGD-MCSFLHTP   
120 36|Q19336_3/13  96.4%  28.6%    LTKMPECFFF---SKYS-------ACS-NR-ECPFRHID   
121 80|Q24580/13-3  92.9%  20.7%    ADN--YCTKY--DETTG-------ICPEGD-ECPYLHRT   
122 80|Q24580_1/13 100.0%  32.1%    IYKSTKCNDV---QQAG-------YCPRSV-FCAFAHVE   
123 G4038036_2/13-  85.7%  25.0%    NPR--DCYYW----LNG-------NCL-NP-KCGFRHPP   
124 16|O65616_1/13  85.7%  25.0%    NQK--VCFHW----RAG-------RCNRYP--CPYLHRE   
125 81|Q24081_4/13 100.0%  24.1%    KSIAAVCNFI---TRNG------QECDKGS-ACPFRHIR   
126 99|O82199_1/13  85.7%  39.3%    RYRTQPCK------DGG-------NCRRR--VCFFAHSP   
127 36|Q19336_4/13  96.4%  25.0%    RSGKAVCRKN----KLK-------MCPFGP-TCPLRHID   
128 05|Q22805_2/13  78.6%  29.2%    ----FPCKSF----HKG-------QCNHDP--CRFSHVP   
129 11|O43311_3/13  92.9%  21.4%    NGRVIACFDS----LKG-------RCSRE--NCKYLHPP   
130 64|Q13064_2/13  96.4%  25.0%    GSGLRFCY-Y---ASRG-------VCFRGE-SCMYLHGD   
131 G4204308_1/13-  85.7%  35.7%    RYRTEACK------DGK-------HCKRK--VCFFAHSP   
132 50|Q94250_1/13  92.9%  24.1%    GRV-TACYDS----IKG-------RCTRENPKCKYLHPP   
133 80|Q24580_2/13  96.4%  22.9%    KYRSTPCPNV----KHGEEWGEPGNCEAGD-NCQYCHTR   
134 80|Q24580_3/13  85.7%  33.3%    NYKTEPCKRP------------PRLCRQGY-ACPQYHNS   
135 18|Q93618_1/13  92.9%  28.9%    NFK--VCKYFLEAVENNKYG-WFWECPNGGEKCQYRHCL   
136 00|Q12000_1/13  92.9%  28.9%    TDK--VCKYFIEAVENGKYG-WFWICPNGGDKCMYRHSL   
    consensus/100%                  ......C..................C......C...H..   
    consensus/90%                   ..t...C..a......u........C..s...C.h.H..   
    consensus/80%                   t.p...C..a.....tG........C.hu..pC.a.H..   
    consensus/70%                   p.p..hCt.a....tpG........C.hGs.pCtahHs.