cov pid 1 [ . . . . : . . . 80 1 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1 100.0% 100.0% YNVKFLKGYGHSISVKDSKIILKSNHDPF--SPPEQEEWFVKNMPYEK-IVLSG-KGYVSTEALSLLSENNRNVILLDNH 2 515506733|Nitro|Nitrosopumilus_sp-_AR 100.0% 85.9% YNIKFLKGYGHSISVKDSKIILKDNHDPF--SEPEIEEWFVKNMPYEK-IVLSG-KGYISTEALSLLSQNNRNVILLDNH 3 407464693|Nitro|Candidatus_Nitrosopumilus_sp-_AR2 100.0% 83.7% YNTKFLKGYGHSISVKNSKIILKDNHDPF--SEPTTEEWFVKNMPYEK-IVLSG-KGYVSTEALSLLSQNNRNVILLDNH 4 325980970|Betap|Nitrosomonas_sp-_AL212 94.2% 20.4% KDVLTLAGNGCSLQVEKGQLVLRSGYSCS--TVTEREKRITRGVHAVRAIIVINTTGNLSTAAIQWCSDQRIALYVLDRD 5 374850936|uncul|uncultured_prokaryote 94.2% 17.6% RGILTLSGI-VRVQVDHGMLVVQDGVADT--RRQARFAKATCGIE---RLVVLGTDGLISFAALKWLYDIGAGFVMLDWS 6 498380613|Actin|Saccharopolyspora_spinosa 97.5% 16.6% PRVIIADGRNVQLRVERGQLSIQDGVGQH--RRTRTLPKIERDVR---RIIVLSDNGYVSWDAARWCADVGITVVQADRS 7 514436645|Actin|Streptomyces_albulus 95.3% 18.7% GPTLIVEGFGTKLTVERGQLVIHDGFGPH--RRTNKLSRIERRVE---RIIITAVDGYVTIDAMRWCKNVGISVVMLDPA 8 516886409|Alpha|Henriciella_marina 97.5% 19.9% ANPLILSGHNISLRIENGTLVMRGGKSRLPRKKRDEYRFFRGSLDLPPRIILIDGSGSLSLAVLDWLREQKLPLIRVRWD 9 289596068|uncla|Aciduliprofundum_boonei_T469 95.3% 24.0% MNPLLVSGYGISINVDKRKLVIR-------EKGKQVHEFYPHQINYDS-LIIEGYYGNISFEAIRWLMKHNITVSVLNWN 10 147921327|Metha|Methanocella_arvoryzae_MRE50 94.9% 24.4% MNPLLIQGFGTRISVEKRRLKIS-------T-ETNDYEFYPHQIDHDT-IVIDGFTGNISFEAMRWIMKHKINLTLLDWN 11 518007794|Metha|Methanomassiliicoccus_luminyensis 97.1% 25.6% MRTLYLSGHGVSLRVENARLLIRDGCEFE-RANPCEYELKPKYDEYDN-IVIYGHSGNITLEALKWLSKQNIQLTILNWD 12 432331395|Metha|Methanoregula_formicica_SMSP 97.5% 24.5% MRFLLLNGHGIDMHVDGAKLFIRDGRFTT-KEEPKQYCFTPQRIDISS-IVIYGRSGNISIEAIRWLIKHGIQITIMNWD 13 410669394|Metha|Methanolobus_psychrophilus_R15 97.1% 27.9% MKFLLLNGHGIDIRVSGAKLHIKDGRSSA-TEDPEVYVFSPKRMDIDS-VIIYGQNGNLTLDAIRWLIKHNVQISILNWD 14 564601588|Metha|Methanolobus_tindarius 97.1% 27.9% MKFLLLNGHGIDVRVSGAKLHVKDGRYST-TEDPEEYVFSPKRMDIDS-VIIYGRKGNLTLDAIRWLIKHNVQISILNWD 15 21229351|Metha|Methanosarcina_mazei_Go1 97.1% 25.5% MKLLLLNGHGINMHVDGAKLHIKDGRFST-TEEPQEYVFSPKRIDIDG-IIIYGKSGNLTLEAIRWLIKHNVQVSILDWN 16 294495965|Metha|Methanohalophilus_mahii_DSM_5219 97.1% 25.8% MKLLLLNGHGIDMRISGAKLHIKEGRFST-TEEPQEYVFSPKRMDIDN-IVVYGKSGNLTLEAIRWLIKHNVQISILNWD 17 91772613|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 25.8% MKLLLLNGHGINMHVDGAKLHIKDGRFST-TEDPQEYVFSPKRMDIDS-IVVYGRSGSLSLEAIRWLIKHNVQITMLDWN 18 91772605|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 24.8% MKLLLLNGHGINMRVDGAKLHIKDGRFSA-TEDPQEYVFSPKRIDIDS-IVVYGRSGSLSFEAIRWLIKHNVQVTMLDWN 19 91772593|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 26.5% MKLLLLNGHGINMRVDSAKLHIKDGRFST-TEDPEEYVFSPKRMDIDS-IVVYGRSGSLSLEAIRWLIKHNVQITILDWN consensus/100% ...hhhtG..hphplptt.l.hp...........t...h..t.......lll.s..G.lohtshphh.p.th.h..hp.t consensus/90% ht.hhlpGhshphplpttplhlp........t..p...h..pth.....lll.s.pG.lohtAhphh.p.thtl.hhs.p consensus/80% hphlhlpGaGhphpVctupLhl+ssh.....ppspp..h.s+phph...lll.u.pG.loh-AlpWl.cpshpl.hLs.s consensus/70% hphLhLsGaGhshpVctu+Lhl+-Gh.sh..pcspph.a.s+phchpp.IllhGhsG.loh-Al+WLhcpslplshLshs cov pid 81 . 1 . . . . : . 160 1 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1 100.0% 100.0% GKPVTF--CNGMMDSLTATKYRMAQYDTFRNPEKCEYLRKQIISAKKESQLKLLRLIGS--------------------- 2 515506733|Nitro|Nitrosopumilus_sp-_AR 100.0% 85.9% GKPVTF--MNGMMDSLTATKYRMAQYDTFRNPEKCEYLTKQIISAKKESQLKLLKLIGS--------------------- 3 407464693|Nitro|Candidatus_Nitrosopumilus_sp-_AR2 100.0% 83.7% GKPVTF--MNGMMDSLTATKYRMAQYDTFRDESKCEYLSQQIIQAKKESQLKLLKLIGS--------------------- 4 325980970|Betap|Nitrosomonas_sp-_AL212 94.2% 20.4% AHLTAL----THAPTPHVVSLRRLQYSV----ET-LTLAKEILYRKFDACIKCMPILA-------QSFTQ-------SA- 5 374850936|uncul|uncultured_prokaryote 94.2% 17.6% NRLLCA----SIAPGRKNALLHRAQALSAYAPVG-LDIVRELLRRKLDGQAQTLADRE-------HGDAA-------SGV 6 498380613|Actin|Saccharopolyspora_spinosa 97.5% 16.6% GRQITT----AADPQPDTDDVRLRRAQAFAGDDGPNAAVGLEIA-KYILARKLDGQAAIVTEYLNNPAVS-------DTI 7 514436645|Actin|Streptomyces_albulus 95.3% 18.7% GDVI------MTSPADTYYEGRLHRAQALGSVEAVRYIMDRKITGQYEVSGHPKIKDHLI-------------------- 8 516886409|Alpha|Henriciella_marina 97.5% 19.9% GKSASTFADNGMPTDPLKVKWQIEQAN---DERARVKFSVNLIRKKLIASRQTLRKLLKEQRAFEKADQVL-------SE 9 289596068|uncla|Aciduliprofundum_boonei_T469 95.3% 24.0% GNLLSV----FLPKEPINGKLKIRQYEIYINEKERLKIAEKILEEKIRKSENMLYELSEYYPEIEHIKVKKRIEKEEKLK 10 147921327|Metha|Methanocella_arvoryzae_MRE50 94.9% 24.4% GNLLGT----WMPKETSVGKLRVKQYAKYLDPTTRYNIAYQIIKEKVKKSCNLLTELSDYYEELDKSEIEEAFINEYTGF 11 518007794|Metha|Methanomassiliicoccus_luminyensis 97.1% 25.6% GRLLAS----ITIPEPKAGGTRLAQYQAFSSE-RRLEIARKIIDAKIRMSIATLDWMVQRYPELKDSKKSC-----FDEL 12 432331395|Metha|Methanoregula_formicica_SMSP 97.5% 24.5% GKLLTT----MLPPESVQVKTKFAQYRAFEDKKLRLQIARQFIDAKFERTHLVLDYLHQRYPDVETDFS----------- 13 410669394|Metha|Methanolobus_psychrophilus_R15 97.1% 27.9% GKLLTT----MLPPESTNVKTKFAQYRVFEDEKARVKIAKNFIEAKFDKTLVVLDYLKQRYPEIDYNLT----------- 14 564601588|Metha|Methanolobus_tindarius 97.1% 27.9% GKLLTT----MLPPESTNVKTRFAQYHAFEDEKARIKIAKNFIEAKFDKTQVVLDYLKQRYPEIEYDFS----------- 15 21229351|Metha|Methanosarcina_mazei_Go1 97.1% 25.5% GKLLTT----MLPPESTNLRTKFAQYHAFEDKEARLEIAKKFIEAKFYKSKAVLDFLSQRYPEINFDIL----------- 16 294495965|Metha|Methanohalophilus_mahii_DSM_5219 97.1% 25.8% GKLLTT----MLPPESTNVKTKFAQYHAFEDEQTRVKLAKKFIEAKFDKSIVVLDFLKQRYPDIEFDFS----------- 17 91772613|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 25.8% GKLLTT----MLPSESTNVKTKFAQYHAYEDSDVRLKLAKKFIEAKFSKSEAVLDYLKQRDPEIEYDFS----------- 18 91772605|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 24.8% GKFLTT----MLPSESTNVKTKFAQYHAYEDQDARVKLARKFIEAKFYKSEAVLDYLKQRYPEIEYDFS----------- 19 91772593|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 26.5% GKLLTT----MLPSESTNVKTKFAQYHAYEDQDTRVKLAKKFIEAKFSKSEAVLDYLKLRYPEINYDIS----------- consensus/100% sp.h.......h..t.....hph.ph...........h....l..ph..t.............................. consensus/90% up.hs.....hh..t...hth+htpht...s..h...h..phlttKh..p..hh..h....................... consensus/80% G+.lsh....hh.sp.pssch+htQhpsh.s.pth..lspphIptKh.tp..hLt.ht...................... consensus/70% G+hlos....hhsspssss+h+htQYpsats.ctphplucphIptKhptshthLphltp.......s............. cov pid 161 . . . 2 . . . . 240 1 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1 100.0% 100.0% -----------EISELPDSEHISAKVYWTEFA------------KFIPEK---YQFHSRNQSHITSSKNNATDIINALLN 2 515506733|Nitro|Nitrosopumilus_sp-_AR 100.0% 85.9% -----------EITELPDKENASARIYWSEFT------------KFIPEK---YGFQSRNQSKIRNSKNNATDIINALLN 3 407464693|Nitro|Candidatus_Nitrosopumilus_sp-_AR2 100.0% 83.7% -----------EVTELSDKENVSAITYWKEFA------------KFIPEK---YGFQSRNQSQIRNSKNNATDIINALLN 4 325980970|Betap|Nitrosomonas_sp-_AL212 94.2% 20.4% ----DSILYANTLEEMRLIEARAAIIYWSTWNNCVIKWKE----KDVPIEWRGFSQRASGIS---GKGYKATHPVNAILN 5 374850936|uncul|uncultured_prokaryote 94.2% 17.6% AVLRDTLNEAPDIPALRAVEAQAAKLYWAAWADVPVRFAR-KDAANVPDNWLSFGSRHSALT---QSPRNASNPANALLN 6 498380613|Actin|Saccharopolyspora_spinosa 97.5% 16.6% RQYAADVAASESVSAARVREGAAGAAYWQAWSGHVIVPFEPREAFSVPAHWTTFVARKSPIDTAKTNGHHAADPINALLN 7 514436645|Actin|Streptomyces_albulus 95.3% 18.7% ----RLQHDVDTIREITAIEAKTSRYYWGSIRGTQVTFRGD-----VPEHWTTFQTRSSALQYAGKTPRKATTPFNAMLN 8 516886409|Alpha|Henriciella_marina 97.5% 19.9% NIQLLKSNPPTSIDKLYAVEGPCAYFYFRAWEGLSLKWKG-LDRHPLPPTWERFEQRSSVLTGKKPKNWRATHPINAMLN 9 289596068|uncla|Aciduliprofundum_boonei_T469 95.3% 24.0% RDMELKEENKPKLSYLLMYEGRVAQIYWKELS------------KIFNKLYPEFNFTSRSTKSY-SWNMNASDEINALLN 10 147921327|Metha|Methanocella_arvoryzae_MRE50 94.9% 24.4% VAY--NKKEQHDINKIMVYEAKTAKAYWDRLT------------KVFNKLYPDFRFTGRRNKSN-SWNMNASDEINALLN 11 518007794|Metha|Methanomassiliicoccus_luminyensis 97.1% 25.6% ALYQSKLPEADSIAKIRGVEGMVARNYWLIVA------------ETFDKK---WEFEGRVFGKT-GRPMAAVDPINALFN 12 432331395|Metha|Methanoregula_formicica_SMSP 97.5% 24.5% -SESAKLTKVTTIKELMGVEGVVAVHYWDQIQ------------KVIPDR---LEFTSRCVGRT-NRPHGAADTVNCMLN 13 410669394|Metha|Methanolobus_psychrophilus_R15 97.1% 27.9% -EDFEKLKKAKSIKEIMGVEGGVVYKYWNEFS------------KAIPEK---YDFESRI-DSS-RRATGAGDMVNAMLN 14 564601588|Metha|Methanolobus_tindarius 97.1% 27.9% -PDLKKLDSAKKINDILGVEGGVAYKYWNEFS------------KVIPEK---YDYESRV-DQS-RRATGAGDMVNTMLN 15 21229351|Metha|Methanosarcina_mazei_Go1 97.1% 25.5% -DGLTKLKDVKSTREILGVEGTLAGKYWIEFS------------KAVPKE---YDFCNRI-DQF-RRAMGSGDMINTMLN 16 294495965|Metha|Methanohalophilus_mahii_DSM_5219 97.1% 25.8% -DDVEKLNKTGTIRGLMGVEGGVAWKYWNEFA------------KAIPAE---YDFCARL-DQY-RRPIAAGDKVNVMLN 17 91772613|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 25.8% -DDKAKLEKANSIRDILGVEGGVAWKYWNEYA------------KAIPEE---YDFRART-DNN-ARASNSGDKINVMFN 18 91772605|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 24.8% -VDKGKLENAKSVREILGIEGGVASKYWNEYS------------KAIPDE---YDFRART-DNN-ARASNSGDKVNVMLN 19 91772593|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 26.5% -VDKGKLENAKSVREILGVEGGVAWKYWNEYA------------KAIPEE---YDFRART-DNN-ARASNSGDKVNVMLN consensus/100% ...........ph..h...Et..s..Ya..ht..............hs.....h..ptp..t.......tusp.hNshhN consensus/90% ...........pltth..hEs.su.hYW.tht..............hs.....at.ptp..t...t...tusp.hNshhN consensus/80% ...........plptlhshEuhsAhhYWtths............c.lPtp...athpup..st..tps.tusc.lNshLN consensus/70% .....p.ttstslpclhshEutsAhhYWppas............KslPcc...apapuRs.sp..tps.sAsD.lNshLN cov pid 241 : . . . . 3 . . 320 1 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1 100.0% 100.0% YGYSVLAGEISKFVCGFGLDPYLGFMHRSH-TGFQPLVYDIIEPFRWLVDYTVYSMANHSSTRQRIKLKEYSFTKDGTVV 2 515506733|Nitro|Nitrosopumilus_sp-_AR 100.0% 85.9% YGYSVLAGEISKYVCGFGLDPYFGFMHKTH-TGFQPLVYDIIEPFRWLVDYSVFKIANHKDSRKQIKLKEYSYTKDGTIV 3 407464693|Nitro|Candidatus_Nitrosopumilus_sp-_AR2 100.0% 83.7% YGYSVLAGEISKYVCGFGLDPYFGFMHKSH-TGFQPLVYDLIEPFRWLVDYSVYKIANNKEKRNRIKLKEYSYTKDGTVV 4 325980970|Betap|Nitrosomonas_sp-_AL212 94.2% 20.4% YAYAILAGQVERALQIVGLDVAVGSLHADQD-GRASLVYDLMEPLRPVIDKIIFAWVTSQ----QWRRADFVIDRQGVIR 5 374850936|uncul|uncultured_prokaryote 94.2% 17.6% YLYALLEAETRLACTALGLHPGLGILHADQT-DRDSFVFDLMEAARPTVDRWLLRFLSEH----RFAKRDFFETPEGGIR 6 498380613|Actin|Saccharopolyspora_spinosa 97.5% 16.6% FAYRLAETECRLACLAVGLDPAMGFHHSDKP-NRDSLALDLLEILRPEVDRFVLDLLSTNGPMRYLSPKLFVEESDGHCR 7 514436645|Actin|Streptomyces_albulus 95.3% 18.7% LGYSIGYAEARLACHALGLDTELGLLHRPKEAKSHSMALDLIEIARPHVDRMVLDLVSER----TFTRKDFYETNEGQCT 8 516886409|Alpha|Henriciella_marina 97.5% 19.9% YAYAVLEADVRLKILAEGYDPRFGIMHRVYKDASDAYVFDLMEPLRPKVDAAVLEFAL----GDTFSPKDFVLRNDGVCR 9 289596068|uncla|Aciduliprofundum_boonei_T469 95.3% 24.0% YSYALLESMIRKHINAVGLDPSIGFLHELA-SSKTPLVYDLQELFRWVSDLSVIQLLE----DKKLKKSSFIVTENYHIR 10 147921327|Metha|Methanocella_arvoryzae_MRE50 94.9% 24.4% YGYAILEAQIRRPINAMGLDPAMGYLHEMK-GSGAPLVYDLQELYRWLIDLSVIQLLE----EKKLKKNDFIVTENYHLR 11 518007794|Metha|Methanomassiliicoccus_luminyensis 97.1% 25.6% YGYSLIEAQCWRAINANGLDPYIGFVHETA-PGKSPLAYDLQEPFRWMADVAVISALE----RNVFEKKDFIRTDNYVLR 12 432331395|Metha|Methanoregula_formicica_SMSP 97.5% 24.5% YGYSLLEAECLRAINSVGLDAHVGYLHEMA-IGKNSLAYDFQELFRFIVDLAVINLIE----ADRMEKKDFIRTDNYTLR 13 410669394|Metha|Methanolobus_psychrophilus_R15 97.1% 27.9% YGYALLEAEGLRAINAVGLDPHVGFLHEMT-TSKNSLAYDLQEPYRFLVDFAVISLIE----SEKMETKDFIRTENYSLR 14 564601588|Metha|Methanolobus_tindarius 97.1% 27.9% YGYALLEAECLRTINAVGLDSHVGFLHEMN-TGKNSLAYDLQEPFRFLVDFAVISLIE----SERMENKDFIRTENYSLR 15 21229351|Metha|Methanosarcina_mazei_Go1 97.1% 25.5% YGYSLLEAECLKAINSVGLDTHVGFLHEMA-PSKNSLAYDLQEPFRFIVDLAVISLIE----SGAMESKDFIRTENYNLR 16 294495965|Metha|Methanohalophilus_mahii_DSM_5219 97.1% 25.8% YGYALLEAECLRAINSVGLDPHVGFLHEMN-SSKNSLAYDLQEPFRFIVDLAVFSLVE----KGAMDKQDFIRTETYALR 17 91772613|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 25.8% YGYALLESECMRAINSVGLDAHVGFLHEMN-PSKNSLAYDLQEPFRFIVDLAVMNLIE----KGVMNNKDFIRTESFSLR 18 91772605|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 24.8% YGYALLESECLRAINSVGLDAHVGFLHEMN-PSKNSLAYDLQEPFRFIVDLAVMNLIE----KEVMDSKDFIRTESFSLR 19 91772593|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 26.5% YGYALLESECLRAINSVGLDAHVGFLHEMN-PSKNSLAYDLQEPFRFIVDLTVMNLIE----KGIMDSKDFIRTESFSLR consensus/100% h.Ytlh.s.h.h.h...Ghcs.hG.hHt....t.tshshDh.E.hR...Dh.lhthh........ht.t.a..p.ph.hh consensus/90% auYulhtuph.hhh.u.GLDs.hGhhHt.t..s.tshshDl.E.hR.hhDh.lhphhp.......hp.ppa..ppph.hh consensus/80% YuYulLtuph.hhlpuhGLDshhGhhHc.t..utpsLsaDL.E.hR.hlDh.Vhphhp.....thhp.p-FhhTpshtlp consensus/70% YGYulLEuEsh+slsuhGLDstlGalHc.p.supssLsYDL.EsaRalVDhsVhpllp....ttthcpKDFlhTcshslR cov pid 321 ] 330 1 407462288|Nitro|Candidatus_Nitrosopumilus_koreensis_AR1 100.0% 100.0% LEYSLIKRFL 2 515506733|Nitro|Nitrosopumilus_sp-_AR 100.0% 85.9% IEYDLIKRFL 3 407464693|Nitro|Candidatus_Nitrosopumilus_sp-_AR2 100.0% 83.7% IEHALIKRFL 4 325980970|Betap|Nitrosomonas_sp-_AL212 94.2% 20.4% VHPQLARIVV 5 374850936|uncul|uncultured_prokaryote 94.2% 17.6% VTLPLRHELT 6 498380613|Actin|Saccharopolyspora_spinosa 97.5% 16.6% LVPPLTHLVA 7 514436645|Actin|Streptomyces_albulus 95.3% 18.7% VGSPLDREII 8 516886409|Alpha|Henriciella_marina 97.5% 19.9% LSPTVTKRLV 9 289596068|uncla|Aciduliprofundum_boonei_T469 95.3% 24.0% LKPQTSKLLV 10 147921327|Metha|Methanocella_arvoryzae_MRE50 94.9% 24.4% LREATAKKLI 11 518007794|Metha|Methanomassiliicoccus_luminyensis 97.1% 25.6% IRPEGVKKLL 12 432331395|Metha|Methanoregula_formicica_SMSP 97.5% 24.5% LRSTGARKIT 13 410669394|Metha|Methanolobus_psychrophilus_R15 97.1% 27.9% LRPSGAKKLT 14 564601588|Metha|Methanolobus_tindarius 97.1% 27.9% LRPSGAKKLT 15 21229351|Metha|Methanosarcina_mazei_Go1 97.1% 25.5% LKPTGARKIV 16 294495965|Metha|Methanohalophilus_mahii_DSM_5219 97.1% 25.8% LKPTGARKVT 17 91772613|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 25.8% LRPTGARKVT 18 91772605|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 24.8% LKPTGARKVT 19 91772593|Metha|Methanococcoides_burtonii_DSM_6242 97.1% 26.5% LRPTGARKVT consensus/100% l...h.+.hh consensus/90% lt..h.+.hh consensus/80% lp.shh+clh consensus/70% lcsshs++lh