Domains within Homo sapiens protein RBM3_HUMAN (P98179)

RNA-binding protein 3

Alternative representations: 1 /

Protein length157 aa
Source databaseUniProt
Identifiers RBM3_HUMAN, P98179, ENSP00000365950.3, ENSP00000365950, ENSP00000365946.1, ENSP00000365946, A0A024QYX3_HUMAN, A0A024QYX3, H2QYJ9_PANTR, H2QYJ9, H9FY14_MACMU, H9FY14, H2PVJ0_PONAB, H2PVJ0, G3QST9_GORGO, G3QST9, A0A2K5WBE5_MACFA, A0A2K5WBE5, A0A0D9RLC1_CHLSB, A0A0D9RLC1, A0A2K6MCK6_RHIBE, A0A2K6MCK6, A0A2K6DQM1_MACNE, A0A2K6DQM1, A0A2K6PYX6_RHIRO, A0A2K6PYX6, A0A2I3MGL6_PAPAN, A0A2I3MGL6, A0A2K5JJ18_COLAP, A0A2K5JJ18, A0A2K6A584_MANLE, A0A2K6A584
Source gene ENSG00000102317
Alternative splicing RBM3_HUMAN, Q9H5V0_HUMAN

Domain architecture analysis

Display all proteins with similar:

Domain organisationProteins having all the domains as the query in the same order. Additional domains are allowed.
Domain compositionProteins with the same domain composition have at least one copy of each of the domains of the query.

This domain architecture was probably invented with the emergence of cellular organisms

Predicted functional partners

RBM3_HUMAN is shown as RBM3 in the network

Click and drag to pan the network, and zoom by using your mouse wheel. Click the protein nodes for additional options.

The network on the left comes from STRING, a database of known and predicted protein interactions. Displayed here is the evidence view, where different line colors represent the types of evidence for the association.

Open the STRING annotation page for RBM3

Protein RBM3_HUMAN is possibly involved in these pathways, based on its similarity to the listed KEGG orthologous groups:

KEGG pathways

PathwayDescription
map03015mRNA surveillance pathway
map03040Spliceosome

KEGG orthologous groups

KONameDescription
K12741HNRNPA1_3heterogeneous nuclear ribonucleoprotein A1/A3
K13195CIRBPcold-inducible RNA-binding protein

Post-translational modifications

PTM annotation is taken from PTMcode, a resource of known and predicted functional associations between protein post-translational modifications (PTMs). There are 25 PTMs annotated in this protein:

PTMCount
Phosphorylation16
Methylation9

To see the full details, including possible functional associations between the PTMs, please visit the PTMcode annotation page for protein RBM3.

Orthologous groups

Orthology information is taken from eggNOG, a database of orthologous groups of genes. Orthologous groups containing this protein are listed below. This protein is named 9606.ENSP00000365950 in eggNOG.

OGTaxonomic classDescription
LKOG0118All organisms (root)heterogeneous nuclear ribonucleoprotein A1/A3,transformer-2 protein,serine/arginine-rich splicing factor 10
KOG0118Eukaryota (superkingdom)heterogeneous nuclear ribonucleoprotein A1/A3,transformer-2 protein,serine/arginine-rich splicing factor 10
HU4KCMetazoa (kingdom)cold-inducible RNA-binding protein,heterogeneous nuclear ribonucleoprotein G,RNA-binding protein 3
93P9PChordata (phylum)RNA-binding protein 3,cold-inducible RNA-binding protein,RNA-binding protein Musashi
5QEIFSarcopterygii (superclass)RNA-binding protein 3,cold-inducible RNA-binding protein
8ZH9SMammalia (class)RNA-binding protein 3
4RHUMEuarchontoglires (superorder)RNA-binding protein 3
4ZJIHPrimates (order)RNA-binding protein 3
98S47Haplorrhini (suborder)RNA-binding protein 3
BVGVASimiiformes (infraorder)RNA-binding protein 3
9EXP7Catarrhini (parvorder)RNA-binding protein 3
7HYUFOpisthokonta (clade)heterogeneous nuclear ribonucleoprotein A1/A3,heterogeneous nuclear ribonucleoprotein A/B/D,cold-inducible RNA-binding protein
9GRFZVertebrata (clade)RNA-binding protein 3,cold-inducible RNA-binding protein
H5CKNBilateria (clade)cold-inducible RNA-binding protein,heterogeneous nuclear ribonucleoprotein G,RNA-binding protein 3
FXEMGHominoidea (superfamily)RNA-binding protein 3
5N7E7Hominidae (family)RNA-binding protein 3
5Y5IWHomininae (subfamily)RNA-binding protein 3

The SMART diagram above represents a summary of the results shown below. Domains with scores less significant than established cutoffs are not shown in the diagram. Features are also not shown when two or more occupy the same piece of sequence; the priority for display is given by SMART > PFAM > PROSPERO repeats > Signal peptide > Transmembrane > Coiled coil > Low complexity. In either case, features not shown in the above diagram are listed in the right side table below, and the reason for their omission is shown in the 'Reason' column.

Confidently predicted domains, repeats, motifs and features:

Outlier homologues and homologues of known structure:

Features NOT shown in the diagram: