The domain within your query sequence starts at position 78 and ends at position 97; the E-value for the HhH1 domain shown below is 2.55e2.
EDLALVSGVGATKLEQVKFE
HhH1Helix-hairpin-helix DNA-binding motif class 1 |
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SMART accession number: | SM00278 |
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Description: | - |
Interpro abstract (IPR003583): | The HhH motif is a stretch of approximately 20 amino acids that is present in prokaryotic and eukaryotic non-sequence-specific DNA binding proteins [ (PUBMED:7664751) (PUBMED:9973609) (PUBMED:9987128) ]. The HhH motif is similar to, but distinct from, the HtH motif. Both of these motifs have two helices connected by a short turn. In the HtH motif the second helix binds to DNA with the helix in the major groove. This allows the contact between specific base and residues throughout the protein. In the HhH motif the second helix does not protrude from the surface of the protein and therefore cannot lie in the major groove of the DNA. Crystallographic studies suggest that the interaction of the HhH domain with DNA is mediated by amino acids located in the strongly conserved loop (L-P-G-V) and at the N-terminal end of the second helix [ (PUBMED:7664751) ]. This interaction could involve the formation of hydrogen bonds between protein backbone nitrogens and DNA phosphate groups [ (PUBMED:8692686) ]. The structural difference between the HtH and HhH domains is reflected at the functional level: whereas the HtH domain, found primarily in gene regulatory proteins and binds DNA in a sequence specific manner, the HhH domain is rather found in proteins involved in enzymatic activities and binds DNA with no sequence specificity [ (PUBMED:8692686) ]. |
GO process: | DNA repair (GO:0006281) |
GO function: | DNA binding (GO:0003677) |
Family alignment: |
There are 311019 HhH1 domains in 190339 proteins in SMART's nrdb database.
Click on the following links for more information.
- Evolution (species in which this domain is found)
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Taxonomic distribution of proteins containing HhH1 domain.
This tree includes only several representative species. The complete taxonomic breakdown of all proteins with HhH1 domain is also avaliable.
Click on the protein counts, or double click on taxonomic names to display all proteins containing HhH1 domain in the selected taxonomic class.
- Metabolism (metabolic pathways involving proteins which contain this domain)
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Click the image to view the interactive version of the map in iPath% proteins involved KEGG pathway ID Description 53.44 map03030 DNA replication 14.05 map00230 Purine metabolism 13.96 map00240 Pyrimidine metabolism 9.66 map03090 Type II secretion system 2.49 map03020 RNA polymerase 2.20 map05212 Pancreatic cancer 1.05 map00500 Starch and sucrose metabolism 1.05 map00790 Folate biosynthesis 0.86 map03010 Ribosome 0.48 map00970 Aminoacyl-tRNA biosynthesis 0.48 map00400 Phenylalanine, tyrosine and tryptophan biosynthesis 0.10 map02060 Phosphotransferase system (PTS) 0.10 map00190 Oxidative phosphorylation 0.10 map00650 Butanoate metabolism This information is based on mapping of SMART genomic protein database to KEGG orthologous groups. Percentage points are related to the number of proteins with HhH1 domain which could be assigned to a KEGG orthologous group, and not all proteins containing HhH1 domain. Please note that proteins can be included in multiple pathways, ie. the numbers above will not always add up to 100%.
- Structure (3D structures containing this domain)
3D Structures of HhH1 domains in PDB
PDB code Main view Title 1b22 RAD51 (N-TERMINAL DOMAIN) 1bdx E. COLI DNA HELICASE RUVA WITH BOUND DNA HOLLIDAY JUNCTION, ALPHA CARBONS AND PHOSPHATE ATOMS ONLY 1bgx TAQ POLYMERASE IN COMPLEX WITH TP7, AN INHIBITORY FAB 1bno NMR SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA, MINIMIZED AVERAGE STRUCTURE 1bnp NMR SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA, 55 STRUCTURES 1bpb CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A COMMON POLYMERASE MECHANISM 1bpd CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A COMMON POLYMERASE MECHANISM 1bpe CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA; EVIDENCE FOR A COMMON POLYMERASE MECHANISM 1bpx DNA POLYMERASE BETA/DNA COMPLEX 1bpy HUMAN DNA POLYMERASE BETA COMPLEXED WITH GAPPED DNA AND DDCTP 1bpz HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA 1bvs RUVA COMPLEXED TO A HOLLIDAY JUNCTION. 1c7y E.COLI RUVA-HOLLIDAY JUNCTION COMPLEX 1cuk ESCHERICHIA COLI RUVA PROTEIN AT PH 4.9 AND ROOM TEMPERATURE 1d8l E. COLI HOLLIDAY JUNCTION BINDING PROTEIN RUVA NH2 REGION LACKING DOMAIN III 1dgs CRYSTAL STRUCTURE OF NAD+-DEPENDENT DNA LIGASE FROM T. FILIFORMIS 1dk2 REFINED SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA 1dk3 REFINED SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA 1doq THE C-TERMINAL DOMAIN OF THE RNA POLYMERASE ALPHA SUBUNIT FROM THERMUS THERMOPHILUS 1hjp HOLLIDAY JUNCTION BINDING PROTEIN RUVA FROM E. COLI 1hqm CRYSTAL STRUCTURE OF THERMUS AQUATICUS CORE RNA POLYMERASE-INCLUDES COMPLETE STRUCTURE WITH SIDE-CHAINS (EXCEPT FOR DISORDERED REGIONS)-FURTHER REFINED FROM ORIGINAL DEPOSITION-CONTAINS ADDITIONAL SEQUENCE INFORMATION 1huo CRYSTAL STRUCTURE OF DNA POLYMERASE BETA COMPLEXED WITH DNA AND CR-TMPPCP 1huz CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCP 1i6v THERMUS AQUATICUS CORE RNA POLYMERASE-RIFAMPICIN COMPLEX 1iw7 Crystal structure of the RNA polymerase holoenzyme from Thermus thermophilus at 2.6A resolution 1ixr RuvA-RuvB complex 1jj2 Fully Refined Crystal Structure of the Haloarcula marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution 1jn3 FIDELITY PROPERTIES AND STRUCTURE OF M282L MUTATOR MUTANT OF DNA POLYMERASE: SUBTLE STRUCTURAL CHANGES INFLUENCE THE MECHANISM OF NUCLEOTIDE DISCRIMINATION 1k73 Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit 1k8a Co-crystal structure of Carbomycin A bound to the 50S ribosomal subunit of Haloarcula marismortui 1k9m Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui 1kc8 Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit 1kd1 Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui 1kft Solution Structure of the C-Terminal domain of UvrC from E-coli 1kg2 Crystal structure of the core fragment of MutY from E.coli at 1.2A resolution 1kg3 Crystal structure of the core fragment of MutY from E.coli at 1.55A resolution 1kg4 Crystal structure of the K142A mutant of E. coli MutY (core fragment) 1kg5 Crystal structure of the K142Q mutant of E.coli MutY (core fragment) 1kg6 Crystal structure of the K142R mutant of E.coli MutY (core fragment) 1kg7 Crystal Structure of the E161A mutant of E.coli MutY (core fragment) 1kqj Crystal Structure of a Mutant of MutY Catalytic Domain 1kqs The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis 1l9u THERMUS AQUATICUS RNA POLYMERASE HOLOENZYME AT 4 A RESOLUTION 1l9z Thermus aquaticus RNA Polymerase Holoenzyme/Fork-Junction Promoter DNA Complex at 6.5 A Resolution 1m1k Co-crystal structure of azithromycin bound to the 50S ribosomal subunit of Haloarcula marismortui 1m90 Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit 1mq2 Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine and dAMP 1mq3 Human DNA Polymerase Beta Complexed With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine Template Paired with dCTP 1mud CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI, D138N MUTANT COMPLEXED TO ADENINE 1mun CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI D138N MUTANT 1muy CATALYTIC DOMAIN OF MUTY FROM ESCHERICHIA COLI 1n8r Structure of large ribosomal subunit in complex with virginiamycin M 1nji Structure of chloramphenicol bound to the 50S ribosomal subunit 1nom DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF MNCL2 (5 MILLIMOLAR) 1nzp Solution Structure of the Lyase Domain of Human DNA Polymerase Lambda 1orn Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Guanine Complex 1orp Structure of a Trapped Endonuclease III-DNA Covalent Intermediate: Estranged-Adenine Complex 1p59 Structure of a non-covalent Endonuclease III-DNA Complex 1pzn Rad51 (RadA) 1q7y Crystal Structure of CCdAP-Puromycin bound at the Peptidyl transferase center of the 50S ribosomal subunit 1q81 Crystal Structure of minihelix with 3' puromycin bound to A-site of the 50S ribosomal subunit. 1q82 Crystal Structure of CC-Puromycin bound to the A-site of the 50S ribosomal subunit 1q86 Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit. 1qvf Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui 1qvg Structure of CCA oligonucleotide bound to the tRNA binding sites of the large ribosomal subunit of Haloarcula marismortui 1rpl 2.3 ANGSTROMS CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF DNA POLYMERASE BETA 1rzt Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA molecule 1s72 REFINED CRYSTAL STRUCTURE OF THE HALOARCULA MARISMORTUI LARGE RIBOSOMAL SUBUNIT AT 2.4 ANGSTROM RESOLUTION 1smy Structural basis for transcription regulation by alarmone ppGpp 1szp A Crystal Structure of the Rad51 Filament 1t4g ATPase in complex with AMP-PNP 1taq STRUCTURE OF TAQ DNA POLYMERASE 1tau TAQ POLYMERASE (E.C.2.7.7.7)/DNA/B-OCTYLGLUCOSIDE COMPLEX 1tv9 HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE ADENINE AND INCOMING CYTIDINE 1tva HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA CONTAINING A MISMATCHED TEMPLATE THYMIDINE AND INCOMING CYTIDINE 1v9p Crystal Structure Of Nad+-Dependent DNA Ligase 1vdd Crystal structure of recombinational repair protein RecR 1vq4 The structure of the transition state analogue ""DAA"" bound to the large ribosomal subunit of Haloarcula marismortui 1vq5 The structure of the transition state analogue ""RAA"" bound to the large ribosomal subunit of haloarcula marismortui 1vq6 The structure of c-hpmn and CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui 1vq7 The structure of the transition state analogue ""DCA"" bound to the large ribosomal subunit of haloarcula marismortui 1vq8 The structure of CCDA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui 1vq9 The structure of CCA-PHE-CAP-BIO and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui 1vqk The structure of CCDA-PHE-CAP-BIO bound to the a site of the ribosomal subunit of haloarcula marismortui 1vql The structure of the transition state analogue ""DCSN"" bound to the large ribosomal subunit of haloarcula marismortui 1vqm The structure of the transition state analogue ""DAN"" bound to the large ribosomal subunit of haloarcula marismortui 1vqn The structure of CC-HPMN AND CCA-PHE-CAP-BIO bound to the large ribosomal subunit of haloarcula marismortui 1vqo The structure of CCPMN bound to the large ribosomal subunit haloarcula marismortui 1vqp The structure of the transition state analogue ""RAP"" bound to the large ribosomal subunit of haloarcula marismortui 1w2b Trigger Factor ribosome binding domain in complex with 50S 1wef Catalytic Domain Of Muty From Escherichia Coli K20A Mutant 1weg Catalytic Domain Od Muty Form Escherichia Coli K142A Mutant 1wei Catalytic Domain Of Muty From Escherichia Coli K20A Mutant Complexed To Adenine 1x2i Crystal Structure Of Archaeal Xpf/Mus81 Homolog, Hef From Pyrococcus Furiosus, Helix-hairpin-helix Domain 1xsl Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gap 1xsn Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gap and ddTTP 1xsp Crystal Structure of human DNA polymerase lambda in complex with nicked DNA and pyrophosphate 1xu4 ATPASE IN COMPLEX WITH AMP-PNP, MAGNESIUM AND POTASSIUM CO-F 1yhq Crystal Structure Of Azithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui 1yi2 Crystal Structure Of Erythromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui 1yij Crystal Structure Of Telithromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui 1yit Crystal Structure Of Virginiamycin M and S Bound To The 50S Ribosomal Subunit Of Haloarcula Marismortui 1yj9 Crystal Structure Of The Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui Containing a three residue deletion in L22 1yjn Crystal Structure Of Clindamycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui 1yjw Crystal Structure Of Quinupristin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui 1ynj Taq RNA polymerase-Sorangicin complex 1ynn Taq RNA polymerase-rifampicin complex 1z00 Solution structure of the C-terminal domain of ERCC1 complexed with the C-terminal domain of XPF 1zjm Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminus 1zjn Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminus with dGTP 1zqa DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) AT PH 7.5 1zqb DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF BACL2 (150 MILLIMOLAR) 1zqc DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) 1zqd DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (150 MILLIMOLAR) 1zqe DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CRCL3 (SATURATED SOLUTION) 1zqf DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CSCL (150 MILLIMOLAR) 1zqg DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF A SODIUM-FREE ARTIFICIAL MOTHER LIQUOR AT PH 6.5 1zqh DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF A SODIUM-FREE ARTIFICIAL MOTHER LIQUOR AT PH 7.5 1zqi DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) 1zqj DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) AND MGCL2 (15 MILLIMOLAR) 1zqk DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (75 MILLIMOLAR) AND MGCL2 (75 MILLIMOLAR) 1zql DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) AND MGCL2 (15 MILLIMOLAR) 1zqm DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) 1zqn DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF BACL2 (15 MILLIMOLAR) AND NACL (15 MILLIMOLAR) 1zqo DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) AND NACL (15 MILLIMOLAR) 1zqp DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (75 MILLIMOLAR) AND NACL (75 MILLIMOLAR) 1zqq DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) AND NACL (15 MILLIMOLAR) 1zqr DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF NICL2 1zqs DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF TLCL (0.5 MILLIMOLAR) 1zqt DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (0.01 MILLIMOLAR) AND ZNCL2 (0.02 MILLIMOLAR) 1zqu DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF ARTIFICIAL MOTHER LIQUOR 1zqv DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF CACL2 (150 MILLIMOLAR) 1zqw DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF CSCL (150 MILLIMOLAR) 1zqx DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) 1zqy DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF MGCL2 (50 MILLIMOLAR) 1zqz DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7), 31-KD DOMAIN; SOAKED IN THE PRESENCE OF MNCL2 (50 MILLIMOLAR) 1zyr Structure of Thermus thermophilus RNA polymerase holoenzyme in complex with the antibiotic streptolydigin 2a1j Crystal Structure of the Complex between the C-Terminal Domains of Human XPF and ERCC1 2a68 Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic rifabutin 2a69 Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with antibiotic rifapentin 2a6e Crystal structure of the T. Thermophilus RNA polymerase holoenzyme 2a6h Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic sterptolydigin 2abk REFINEMENT OF THE NATIVE STRUCTURE OF ENDONUCLEASE III TO A RESOLUTION OF 1.85 ANGSTROM 2b21 RADA Recombinase in complex with AMPPNP at pH 6.0 2bcq DNA polymerase lambda in complex with a DNA duplex containing an unpaired Dtmp 2bcr DNA polymerase lambda in complex with a DNA duplex containing an unpaired Damp 2bcs DNA polymerase lambda in complex with a DNA duplex containing an unpaired Dcmp 2bcu DNA polymerase lambda in complex with a DNA duplex containing an unpaired Damp and a T:T mismatch 2bcv DNA polymerase lambda in complex with Dttp and a DNA duplex containing an unpaired Dtmp 2be5 Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with inhibitor tagetitoxin 2bgw XPF from Aeropyrum pernix, complex with DNA 2bhn XPF from Aeropyrum pernix 2bpc CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A COMMON POLYMERASE MECHANISM 2bpf STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, A DNA TEMPLATE-PRIMER, AND DDCTP 2bpg STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, A DNA TEMPLATE-PRIMER, AND DDCTP 2csb Crystal structure of Topoisomerase V from Methanopyrus kandleri (61 kDa fragment) 2csd Crystal structure of Topoisomerase V (61 kDa fragment) 2cw0 Crystal structure of Thermus thermophilus RNA polymerase holoenzyme at 3.3 angstroms resolution 2duy Crystal structure of competence protein ComEA-related protein from Thermus thermophilus HB8 2edu Solution structure of RSGI RUH-070, a C-terminal domain of kinesin-like protein KIF22 from human cDNA 2f1h RECOMBINASE IN COMPLEX WITH AMP-PNP and Potassium 2f1i Recombinase in Complex with AMP-PNP 2f1j Recombinase in Complex with ADP 2fmp DNA Polymerase beta with a terminated gapped DNA substrate and ddCTP with sodium in the catalytic site 2fmq Sodium in active site of DNA Polymerase Beta 2fms DNA Polymerase beta with a gapped DNA substrate and dUMPNPP with magnesium in the catalytic site 2fpk RadA recombinase in complex with ADP 2fpl RadA recombinase in complex with AMP-PNP and low concentration of K+ 2fpm RadA recombinase in complex with AMP-PNP and high concentration of K+ 2gho Recombinant Thermus aquaticus RNA polymerase for Structural Studies 2gws Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminus 2h56 Crystal structure of DNA-3-methyladenine glycosidase (10174367) from Bacillus halodurans at 2.55 A resolution 2h5x RuvA from Mycobacterium tuberculosis 2i1q RadA Recombinase in complex with Calcium 2i9g DNA Polymerase Beta with a Benzo[c]phenanthrene diol epoxide adducted guanine base 2iso Ternary complex of DNA Polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-difluoromethylene triphosphate 2isp Ternary complex of DNA Polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-methylene triphosphate 2jhj 3-methyladenine dna-glycosylase from Archaeoglobus fulgidus 2jhn 3-methyladenine dna-glycosylase from Archaeoglobus fulgidus 2mut 2MUT 2nrt Crystal structure of the C-terminal half of UvrC 2nrv Crystal structure of the C-terminal half of UvrC 2nrw Crystal structure of the C terminal half of UvrC 2nrx Crystal structure of the C-terminal half of UvrC, in the presence of sulfate molecules 2nrz Crystal structure of the C-terminal half of UvrC bound to its catalytic divalent cation 2o5i Crystal structure of the T. thermophilus RNA polymerase elongation complex 2o5j Crystal structure of the T. thermophilus RNAP polymerase elongation complex with the NTP substrate analog 2oce Crystal structure of Tex family protein PA5201 from Pseudomonas aeruginosa 2otj 13-deoxytedanolide bound to the large subunit of Haloarcula marismortui 2otl Girodazole bound to the large subunit of Haloarcula marismortui 2owo Last Stop on the Road to Repair: Structure of E.coli DNA Ligase Bound to Nicked DNA-Adenylate 2p66 Human DNA Polymerase beta complexed with tetrahydrofuran (abasic site) containing DNA 2p6r Crystal structure of superfamily 2 helicase Hel308 in complex with unwound DNA 2p6u Apo structure of the Hel308 superfamily 2 helicase 2pfn Na in the active site of DNA Polymerase lambda 2pfo DNA Polymerase lambda in complex with DNA and dUPNPP 2pfp DNA Polymerase lambda in complex with DNA and dCTP 2pfq Manganese promotes catalysis in a DNA polymerase lambda-DNA crystal 2ppb Crystal structure of the T. thermophilus RNAP polymerase elongation complex with the ntp substrate analog and antibiotic streptolydigin 2pxi Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphate 2qa4 A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit 2qex Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit 2v1c Crystal structure and mutational study of RecOR provide insight into its role in DNA repair 2va8 DNA Repair Helicase Hel308 2van Crystal structure of DNA polymerase beta 2w9m Structure of family X DNA polymerase from Deinococcus radiodurans 2yg8 Structure of an unusual 3-METHYLADENINE DNA GLYCOSYLASE II (ALKA) FROM DEINOCOCCUS RADIODURANS 2yg9 Structure of an unusual 3-METHYLADENINE DNA GLYCOSYLASE II (ALKA) FROM DEINOCOCCUS RADIODURANS 2ziu Crystal structure of the Mus81-Eme1 complex 2ziv Crystal structure of the Mus81-Eme1 complex 2ziw Crystal structure of the Mus81-Eme1 complex 2zix Crystal structure of the Mus81-Eme1 complex 2zj2 Archaeal DNA helicase Hjm apo state in form 1 2zj5 Archaeal DNA helicase Hjm complexed with ADP in form 1 2zj8 Archaeal DNA helicase Hjm apo state in form 2 2zja Archaeal DNA helicase Hjm complexed with AMPPCP in form 2 2ztc MtRuvA Form II 2ztd MtRuvA Form III 2zte MtRuvA Form IV 3aoh RNA polymerase-Gfh1 complex (Crystal type 1) 3aoi RNA polymerase-Gfh1 complex (Crystal type 2) 3au2 DNA polymerase X from Thermus thermophilus HB8 complexed with Ca-dGTP 3au6 DNA polymerase X from Thermus thermophilus HB8 ternary complex with primer/template DNA and ddGTP 3auo DNA polymerase X from Thermus thermophilus HB8 ternary complex with 1-nt gapped DNA and ddGTP 3b0x K263A mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP 3b0y K263D mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP 3bzc Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form I 3bzk Crystal Structure of the Tex protein from Pseudomonas aeruginosa, crystal form 2 3c1y Structure of bacterial DNA damage sensor protein with co-purified and co-crystallized ligand 3c1z Structure of the ligand-free form of a bacterial DNA damage sensor protein 3c21 Structure of a bacterial DNA damage sensor protein with reaction product 3c23 Structure of a bacterial DNA damage sensor protein with non-reactive Ligand 3c2k DNA POLYMERASE BETA with a gapped DNA substrate and DUMPNPP with Manganese in the active site 3c2l Ternary complex of DNA POLYMERASE BETA with a C:DAPCPP mismatch in the active site 3c2m Ternary complex of DNA POLYMERASE BETA with a G:dAPCPP mismatch in the active site 3c5f Structure of a binary complex of the R517A Pol lambda mutant 3c5g Structure of a ternary complex of the R517K Pol lambda mutant 3c65 Crystal Structure of Bacillus stearothermophilus UvrC 5' endonuclease domain 3cc2 The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins 3cc4 Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit 3cc7 Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2487U 3cce Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A 3ccj Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U 3ccl Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model. 3ccm Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U 3ccq Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U 3ccr Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model. 3ccs Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A 3ccu Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C 3ccv Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2616A 3cd6 Co-cystal of large Ribosomal Subunit mutant G2616A with CC-Puromycin 3cma The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui 3cme The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui 3cpw The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI 3cxc The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui 3dxj Crystal structure of thermus thermophilus rna polymerase holoenzyme in complex with the antibiotic myxopyronin 3eql Crystal structure of the T. Thermophilus RNA polymerase holoenzyme in complex with antibiotic myxopyronin 3etl RadA recombinase from Methanococcus maripaludis in complex with AMPPNP 3ew9 RADA recombinase from METHANOCOCCUS MARIPALUDIS in complex with AMPPNP and potassium ions 3ewa RADA recombinase from METHANOCOCCUS MARIPALUDIS in complex with AMPPNP and ammonium ions 3f0z Crystal structure of Clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in its apo-form 3fyh Recombinase in complex with ADP and metatungstate 3gdx Dna polymerase beta with a gapped DND substrate and dTMP(CF2)PP 3hw8 ternary complex of DNA polymerase lambda of a two nucleotide gapped DNA substrate with a C in the scrunch site 3hwt Ternary complex of DNA polymerase lambda bound to a two nucleotide gapped DNA substrate with a scrunched dA 3hx0 ternary complex of L277A, H511A, R514 mutant pol lambda bound to a 2 nucleotide gapped DNA substrate with a scrunched dA 3i55 Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit 3i56 Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit 3isb Binary complex of human DNA polymerase beta with a gapped DNA 3isc Binary complex of human DNA polymerase beta with an abasic site (THF) in the gapped DNA 3isd Ternary complex of human DNA polymerase beta with an abasic site (THF): DAPCPP mismatch 3jpn Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dichloro methylene triphosphate 3jpo Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochloromethylene triphosphate 3jpp Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-MonoMethyl Methylene triphosphate 3jpq Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monoBromo methylene triphosphate 3jpr Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-dimethyl methylene triphosphate 3jps Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro methyl methylene triphosphate 3jpt Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-fluoro chloro methylene triphosphate 3k75 X-ray crystal structure of reduced XRCC1 bound to DNA pol beta catalytic domain 3lda Yeast Rad51 H352Y Filament Interface Mutant 3lk9 DNA polymerase beta with a gapped DNA substrate and dTMP(CF2)P(CF2)P 3maj Crystal structure of putative DNA processing protein DprA from Rhodopseudomonas palustris CGA009 3mby Ternary complex of DNA Polymerase BETA with template base A and 8oxodGTP in the active site with a dideoxy terminated primer 3mda DNA polymerase lambda in complex with araC 3mdc DNA polymerase lambda in complex with dFdCTP 3mgh Binary complex of a DNA polymerase lambda loop mutant 3mgi Ternary complex of a DNA polymerase lambda loop mutant 3ntu RADA RECOMBINASE D302K MUTANT IN COMPLEX with AMP-PNP 3ogu DNA Polymerase beta mutant 5P20 complexed with 6bp of DNA 3pml crystal structure of a polymerase lambda variant with a dGTP analog opposite a templating T 3pmn ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active site 3pnc Ternary crystal structure of a polymerase lambda variant with a GT mispair at the primer terminus and sodium at catalytic metal site 3rh4 DNA Polymerase Beta with a dideoxy-terminated primer with an incoming ribonucleotide (rCTP) 3rh5 DNA Polymerase Beta Mutant (Y271) with a dideoxy-terminated primer with an incoming deoxynucleotide (dCTP) 3rh6 DNA Polymerase Beta Mutant (Y271) with a dideoxy-terminated primer with an incoming ribonucleotide (rCTP) 3rje Ternary complex of DNA Polymerase Beta with a gapped DNA containing 8odG at template position 3rjf Ternary complex of DNA Polymerase Beta with a gapped DNA containing (syn)8odG at template position paired with non-hydrolyzable dATP analog (dApCPP) 3rjg Binary complex of DNA Polymerase Beta with a gapped DNA containing 8odG:dA base-pair at primer Terminus 3rjh Ternary complex of DNA Polymerase Beta with a gapped DNA containing (syn)8odG:dA at primer terminus and dG:dCMP(CF2)PPin the active site 3rji Ternary complex of DNA Polymerase Beta with a gapped DNA containing 8odG at template position paired with non-hydrolyzable dCTP analog (dCMP(CF2)PP) 3rjj Ternary complex crystal structure of DNA Polymerase Beta with template 8odG provides insight into mutagenic lesion bypass 3rjk Ternary complex of DNA Polymerase Beta with a gapped DNA containing 8odG:dC base pair at primer terminus and dG:dCMP(CF2)PP in the active site 3s6i Schizosaccaromyces pombe 3-methyladenine DNA glycosylase (Mag1) in complex with abasic-DNA. 3sgi Crystal structure of DNA ligase A BRCT domain deleted mutant of Mycobacterium tuberculosis 3tfr Ternary complex structure of DNA polymerase beta with a gapped DNA substrate and a, b dAMP(CF2)PP in the active site 3tfs Ternary complex structure of DNA polymerase beta with a gapped DNA substrate and a, b dAMP(CFH)PP in the active site: Stereoselective binding of (S) isomer 3upq Crystal structure of the pre-catalytic ternary complex of polymerase lambda with an rATP analog opposite a templating T. 3uq0 Crystal structure of the post-catalytic product complex of polymerase lambda with an rAMP at the primer terminus. 3uq2 Crystal structure of the post-catalytic product complex of polymerase lambda with an rCMP inserted opposite a templating G and dAMP inserted opposite a templating T at the primer terminus. 3uxn Crystal Structure of Rat DNA Polymerase Beta, Wild Type Apoenzyme 3uxo Crystal Structure of Rat DNA Polymerase Beta Mutator I260Q Apoenzyme 3uxp Co-crystal Structure of Rat DNA polymerase beta Mutator I260Q: Enzyme-DNA-ddTTP 3v72 Crystal Structure of Rat DNA polymerase beta Mutator E295K: Enzyme-dsDNA 3v7j Co-crystal structure of Wild Type Rat polymerase beta: Enzyme-DNA binary complex 3v7k Co-crystal structure of K72E variant of rat polymerase beta: Enzyme-DNA binary complex 3v7l Apo Structure of Rat DNA polymerase beta K72E variant 3vdp Structure and biochemical studies of the recombination mediator protein RecR in RecFOR pathway 3vdu Structure of recombination mediator protein RecRK21G mutant 3wod RNA polymerase-gp39 complex 3zd8 Potassium bound structure of E. coli ExoIX in P1 3zd9 Potassium bound structure of E. coli ExoIX in P21 3zda Structure of E. coli ExoIX in complex with a fragment of the Flap1 DNA oligonucleotide, potassium and magnesium 3zdb Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, di-magnesium and potassium 3zdc Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, potassium and calcium 3zdd Structure of E. coli ExoIX in complex with the palindromic 5ov6 oligonucleotide and potassium 3zde Potassium free structure of E. coli ExoIX 4adx The Cryo-EM Structure of the Archaeal 50S Ribosomal Subunit in Complex with Initiation Factor 6 4ak9 Structure of chloroplast FtsY from Physcomitrella patens 4do9 Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphate: stereoselective binding of r-isomer 4doa Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphate: non-interactive binding of s-isomer 4dob Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochlororomethylene triphosphate: Stereoselective binding of R-isomer 4doc Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochlororomethylene triphosphate:binding of S-isomer 4ejy Structure of MBOgg1 in complex with high affinity DNA ligand 4ejz Structure of MBOgg1 in complex with low affinity DNA ligand 4f5n Open ternary complex of R283K DNA polymerase beta with a metal free dCTP analog 4f5o Open ternary complex of R283K DNA polymerase beta with a one metal bound dCTP analog 4f5p Open ternary mismatch complex of R283K DNA polymerase beta with a dATP analog 4f5q Closed ternary complex of R283K DNA polymerase beta 4f5r Open and closed ternary complex of R283K DNA polymerase beta with a dCTP analog in the same asymmetric unit 4fo6 Crystal structure of the pre-catalytic ternary complex of polymerase lambda with a dATP analog opposite a templating T and an rCMP at the primer terminus. 4g7h Crystal structure of Thermus thermophilus transcription initiation complex 4g7o Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA 4g7z Crystal structure of Thermus thermophilus transcription initiation complex containing 5-BrU at template-strand position +1 4gfj Crystal structure of Topo-78, an N-terminal 78kDa fragment of topoisomerase V 4glx DNA ligase A in complex with inhibitor 4gxi R283K DNA polymerase beta binary complex with a templating 8OG 4gxj R283K DNA polymerase beta ternary complex with a templating 8OG and incoming dCTP analog 4gxk R283K DNA polymerase beta ternary complex with a templating 8OG and incoming dATP analog 4gzy Crystal structures of bacterial RNA Polymerase paused elongation complexes 4gzz Crystal structures of bacterial RNA Polymerase paused elongation complexes 4itq Crystal structure of hypothetical protein SCO1480 bound to DNA 4jcv Crystal structure of the RecOR complex in an open conformation 4jwm Ternary complex of D256E mutant of DNA Polymerase Beta 4jwn Ternary complex of D256A mutant of DNA Polymerase Beta 4k4g 4K4G 4k4h 4K4H 4k4i 4K4I 4kld DNA polymerase beta matched substrate complex with Ca2+, 0 s 4kle DNA polymerase beta matched reactant complex with Mg2+, 10 s 4klf DNA polymerase beta matched reactant complex with Mg2+, 20 s 4klg DNA polymerase beta matched product complex with Mg2+, 40 s 4klh DNA polymerase beta matched product complex with Mn2+, 40 s 4kli DNA polymerase beta matched product complex with Mg2+, 90 s 4klj DNA polymerase beta matched product complex with Mg2+, 5 min 4kll DNA polymerase beta matched product complex with Mg2+, 45 min 4klm DNA polymerase beta matched product complex with Mg2+, 11 h 4klo DNA polymerase beta matched nick complex with Mg2+ and PPi, 30 min 4klq Observing a DNA polymerase choose right from wrong. 4kls DNA polymerase beta mismatched reactant complex with Mn2+, 10 min 4klt DNA polymerase beta mismatched product complex with Mn2+, 30 min 4klu DNA polymerase beta mismatched product complex with Mn2+, 15 h 4lvs DNA polymerase beta mismatched substrate complex with Mn2+, 2.5 min 4m2y Structure of human DNA polymerase beta complexed with 8-BrG as the template base in a 1-nucleotide gapped DNA 4m47 structure of human DNA polymerase complexed with 8-BrG in the template base paired with incoming non-hydrolyzable GTP 4m9g DNA Polymerase Beta E295K Binary Complex 4m9h DNA Polymerase Beta E295K Soaked with dTTP 4m9j DNA Polymerase Beta E295K Soaked with dUMPNPP 4m9l DNA Polymerase Beta E295K Soaked with dCTP 4m9n DNA Polymerase Beta E295K Soaked with dATP 4mf2 Structure of human DNA polymerase beta complexed with O6MG as the template base in a 1-nucleotide gapped DNA 4mf8 4MF8 4mfa 4MFA 4mfc Structure of human DNA polymerase beta complexed with O6MG in the template base paired with incoming non-hydrolyzable CTP 4mff Structure of human DNA polymerase beta complexed with O6MG in the template base paired with incoming non-hydrolyzable TTP 4mq9 Crystal structure of Thermus thermophilus RNA polymerase holoenzyme in complex with GE23077 4nlk Structure of human DNA polymerase beta complexed with 8BrG in the template base-paired with incoming non-hydrolyzable CTP 4nln Structure of human DNA polymerase beta complexed with nicked DNA containing a template 8BrG and incoming CTP 4nlz Structure of human DNA polymerase beta complexed with nicked DNA containing a mismatched template 8BrG and incoming GTP 4nm1 Structure of human DNA polymerase beta complexed with a nicked DNA containing a 8BrG-C at N-1 position and G-C at N position 4nm2 Structure of human DNA polymerase beta complexed with a nicked DNA containing a 8BrG-G at N-1 position and G-C at N position 4nxz DNA polymerase beta with O6mG in the template base opposite to incoming non-hydrolyzable TTP with manganese in the active site 4ny8 DNA polymerase beta with O6mG in the template base opposite to incoming non-hydrolyzable CTP with manganese in the active site 4o5c 4O5C 4o5e 4O5E 4o5k 4O5K 4o6o 4O6O 4o6p 4O6P 4o9m Human DNA polymerase beta complexed with adenylated tetrahydrofuran (abasic site) containing DNA 4oin Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077 4oio Crystal structure of Thermus thermophilus pre-insertion substrate complex for de novo transcription initiation 4oip Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077, ATP, and CMPcPP 4oiq Crystal structure of Thermus thermophilus transcription initiation complex soaked with GE23077 and rifampicin 4oir Crystal structure of Thermus thermophilus RNA polymerase transcription initiation complex soaked with GE23077 and rifamycin SV 4p0p 4P0P 4p0q 4P0Q 4p0r 4P0R 4p0s 4P0S 4p2h 4P2H 4p4m 4P4M 4p4o 4P4O 4p4p 4P4P 4pgq 4PGQ 4pgx 4PGX 4pgy 4PGY 4ph5 4PH5 4pha 4PHA 4phd 4PHD 4phe 4PHE 4php 4PHP 4ppx DNA Polymerase Beta E295K with Spiroiminodihydantoin in Templating Position 4q4z 4Q4Z 4q5s 4Q5S 4r63 4R63 4r64 4R64 4r65 4R65 4r66 4R66 4rpx 4RPX 4rpy 4RPY 4rpz 4RPZ 4rq0 4RQ0 4rq1 4RQ1 4rq2 4RQ2 4rq3 4RQ3 4rq4 4RQ4 4rq5 4RQ5 4rq6 4RQ6 4rq7 4RQ7 4rq8 4RQ8 4rt2 4RT2 4rt3 4RT3 4tup 4TUP 4tuq 4TUQ 4tur 4TUR 4tus 4TUS 4uaw 4UAW 4uay 4UAY 4uaz 4UAZ 4ub1 4UB1 4ub2 4UB2 4ub3 4UB3 4ub4 4UB4 4ub5 4UB5 4ubb 4UBB 4ubc 4UBC 4v9f 4V9F 4wqs 4WQS 4wqt 4WQT 4x5v 4X5V 4xa5 4XA5 4xln 4XLN 4xlp 4XLP 4xlq 4XLQ 4xlr 4XLR 4xls 4XLS 4xq8 4XQ8 4xrh 4XRH 4xus 4XUS 4ymm 4YMM 4ymn 4YMN 4ymo 4YMO 4yn4 4YN4 4yvz 4YVZ 4yxj 4YXJ 4yxm 4YXM 4z6c 4Z6C 4z6d 4Z6D 4z6e 4Z6E 4z6f 4Z6F 5bol 5BOL 5bom 5BOM 5bpc 5BPC 5ca7 5CA7 5cb1 5CB1 5chg 5CHG 5cj7 5CJ7 5cp2 5CP2 5cr0 5CR0 5cwr 5CWR 5d4c 5D4C 5d4d 5D4D 5d4e 5D4E 5db6 5DB6 5db7 5DB7 5db8 5DB8 5db9 5DB9 5dba 5DBA 5dbb 5DBB 5dbc 5DBC 5ddm 5DDM 5ddy 5DDY 5dkw 5DKW 5e17 5E17 5e18 5E18 5eoz 5EOZ 5hm5 5HM5 5i2d 5I2D 5iii 5III 5iij 5IIJ 5iik 5IIK 5iil 5IIL 5iim 5IIM 5iin 5IIN 5iio 5IIO 5j0o 5J0O 5j0p 5J0P 5j0q 5J0Q 5j0r 5J0R 5j0s 5J0S 5j0t 5J0T 5j0u 5J0U 5j0v 5J0V 5j0w 5J0W 5j0x 5J0X 5j0y 5J0Y 5j29 5J29 5j2a 5J2A 5j2b 5J2B 5j2c 5J2C 5j2d 5J2D 5j2e 5J2E 5j2f 5J2F 5j2g 5J2G 5j2h 5J2H 5j2i 5J2I 5j2j 5J2J 5j2k 5J2K 5jzc 5JZC 5tmc 5TMC 5tmf 5TMF 7ice DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF CACL2 7icf DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CDCL2 (0.1 MILLIMOLAR) (FOUR-DAY SOAK) 7icg DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF CDCL2 7ich DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF COCL2 7ici DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CRCL3 (0.1 MILLIMOLAR) 7icj DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CUCL2 (0.1 MILLIMOLAR) 7ick DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF MGCL2 7icl DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (0.1 MILLIMOLAR) 7icm DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (1.0 MILLIMOLAR) 7icn DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF NICL2 7ico DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 7icp DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ZNCL2 (0.01 MILLIMOLAR) 7icq DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 7icr DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 7ics DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 7ict DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ZNCL2 AND MGCL2 7icu DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF CDCL2 (0.1 MILLIMOLAR) 7icv DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (0.1 MILLIMOLAR) AND IN THE ABSENCE OF NACL 8ica DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CACL2 (5 MILLIMOLAR) 8icb DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ARTIFICIAL MOTHER LIQUOR 8icc DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA (NO 5'-PHOSPHATE) 8ice DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CDCL2 (1 MILLIMOLAR) 8icf DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (10 MILLIMOLAR) AND MGCL2 (50 MILLIMOLAR) 8icg DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) 8ich DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) 8ici DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) 8icj DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + THYMIDINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DTTP AND MGCL2 8ick DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MGCL2 (5 MILLIMOLAR), AND MNCL2 (5 MILLIMOLAR) 8icl DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND NICL2 (5 MILLIMOLAR) 8icm DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MNCL2 (5 MILLIMOLAR), AND AMMONIUM SULFATE (75 MILLIMOLAR) 8icn DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF ATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8ico DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF AZT-TP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8icp DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8icq DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (0.1 MILLIMOLAR) AND MNCL2 (0.5 MILLIMOLAR) 8icr DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8ics DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8ict DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8icu DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DDATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8icv DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8icw DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8icx DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 8icy DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + THYMIDINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DTTP AND MNCL2 8icz DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (1 MILLIMOLAR), MNCL2 (5 MILLIMOLAR), AND LITHIUM SULFATE (75 MILLIMOLAR) 9ica DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-O-(1-THIOTRIPHOSPHATE), SOAKED IN THE PRESENCE OF DATP(ALPHA)S AND MNCL2 9icb DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND COCL2 9icc DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND CRCL3 9ice DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND CUCL2 (0.1 MILLIMOLAR) 9icf DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 9icg DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) 9ich DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) 9ici DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND ZNCL2 (1 MILLIMOLAR) 9icj DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA 9ick DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF ARTIFICIAL MOTHER LIQUOR 9icl DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF PYROPHOSPHATE AND MNCL2 9icm DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DOUBLE STRANDED DNA (NO 5'-PHOSPHATE) 9icn DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2',3'-DIDEOXYCYTIDINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DDCTP AND MGCL2 9ico DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE PRESENCE OF DTTP AND MGCL2 9icp DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF PYROPHOSPHATE (1 MILLIMOLAR) AND MGCL2 (5 MILLIMOLAR) 9icq DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 9icr DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DCTP AND MNCL2 9ics DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2',3'-DIDEOXYCYTIDINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DDCTP AND MNCL2 9ict DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DGTP AND MNCL2 9icu DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND MNCL2 (5 MILLIMOLAR) 9icv DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 9icw DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA; NATIVE STRUCTURE 9icx DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE PAIRS OF DNA (NON GAPPED DNA ONLY) 9icy DNA POLYMERASE BETA (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS OF DNA (NON GAPPED DNA ONLY) - Links (links to other resources describing this domain)
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PFAM HHH INTERPRO IPR003583