The domain within your query sequence starts at position 192 and ends at position 245; the E-value for the Acyl-CoA_dh_M domain shown below is 5.1e-20.
AFCLTEPSSGSDVASIRSSAIPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTP
Acyl-CoA_dh_M |
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PFAM accession number: | PF02770 |
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Interpro abstract (IPR006091): | Acyl-CoA dehydrogenases ( EC 1.3.99.3 ) are a family of flavoproteins that catalyse the alpha,beta-dehydrogenation of acyl-CoA thioesters to the corresponding trans 2,3-enoyl CoA-products with the concomitant reduction of enzyme-bound FAD. Different family members share a high sequence identity, catalytic mechanisms, and structural properties, but differ in the position of their catalytic bases and in their substrate binding specificity. Butyryl-CoA dehydrogenase [ (PUBMED:11812788) ] prefers short chain substrates, medium chain- and long-chain acyl-CoA dehydrogenases prefer medium and long chain substrates, respectively, and Isovaleryl-CoA dehydrogenase [ (PUBMED:9214289) ] prefers branched-chain substrates. The monomeric enzyme is folded into three domains of approximately equal size, where the N-terminal domain is all-alpha, the middle domain is an open (5,8) barrel, and the C-terminal domain is a four-helical bundle. The constituent families differ in the numbers of C-terminal domains. This entry represents the middle beta-barrel domain found in medium chain acyl-CoA dehydrogenases, as well as in the related peroxisomal acyl-CoA oxidase-II enzymes. Acyl-CoA oxidase (ACO; EC 1.3.3.6 ) catalyzes the first and rate-determining step of the peroxisomal beta-oxidation of fatty acids [ (PUBMED:11872165) ]. |
GO process: | oxidation-reduction process (GO:0055114) |
GO function: | oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627) |
This is a PFAM domain. For full annotation and more information, please see the PFAM entry Acyl-CoA_dh_M