 SFMSplicing Factor Motif, present in Prp18 and Pr04 | |
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| SMART ACC: | SM000500 |
| Description: | - |
| InterPro ACC: | IPR014906 |
| InterPro abstract: | This small domain is found on PRP4 ribonuleoproteins. PRP4 is a U4/U6 small nuclear ribonucleoprotein that is involved in pre-mRNA processing [ PUBMED:528687 ]. It is also found in pre-mRNA-splicing factor 18 [ PUBMED:9000057 ]. |
| Family alignment: | View the Family alignment or the Alignment consensus sequence |
| There are 1 137 SFM domains in 1 133 proteins in SMART's NRDB database. | |
Taxonomic distribution of proteins containing SFM domains
The tree below includes only several representative species and genera. The complete taxonomic breakdown of all proteins containing SFM domains can be accessed here. Click the counts or percentage values to display the corresponding proteins.
Predicted cellular role
| Cellular role: | Transcription |
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KEGG pathways involving proteins which contain this domain
This information is based on the mapping of SMART genomic protein database to KEGG orthologous groups. Percentages are related to the number of proteins containing a SFM domain which could be assigned to a KEGG orthologous group, and not all proteins containing SFM domains. Please note that proteins can be included in multiple pathways, ie. the numbers below will not add to 100%.
KEGG pathways
KEGG orthologous groups
3D structures in PDB containing this domain
Links to other resources describing this domain
| InterPro | IPR014906 |
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